; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G015220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAcyl-CoA dehydrogenase
Genome locationCmo_Chr06:10822062..10823171
RNA-Seq ExpressionCmoCh06G015220
SyntenyCmoCh06G015220
Gene Ontology termsGO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR037069 - Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049515.1 putative acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo var. makuwa]2.9e-5984.67Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKA+AF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

XP_008438907.1 PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X1 [Cucumis melo]7.6e-6085.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKADAF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

XP_011651064.1 probable acyl-CoA dehydrogenase IBR3 [Cucumis sativus]3.2e-5885.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA+IA +KA+A +DAAW FIEQKS+LPENPP  SDSIVQVDSQ TRKE E W ILKDEGKFVPSKKVMELR KLIKFM+DHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

XP_016898966.1 PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X2 [Cucumis melo]7.6e-6085.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKADAF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

XP_038897612.1 probable acyl-CoA dehydrogenase IBR3 [Benincasa hispida]1.9e-5885.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA+ AGEKA AF+DAAW FIEQKS+LPENPP   DSIVQVDSQ TRKENE W ILKD GKFVPSKKVMELR KLIKFME HIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAK+EGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

TrEMBL top hitse value%identityAlignment
A0A0A0L5U9 Uncharacterized protein1.6e-5885.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA+IA +KA+A +DAAW FIEQKS+LPENPP  SDSIVQVDSQ TRKE E W ILKDEGKFVPSKKVMELR KLIKFM+DHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

A0A1S3AX44 probable acyl-CoA dehydrogenase IBR3 isoform X13.7e-6085.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKADAF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

A0A1S4DSK0 probable acyl-CoA dehydrogenase IBR3 isoform X23.7e-6085.4Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKADAF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

A0A5D3CXJ9 Putative acyl-CoA dehydrogenase IBR3 isoform X11.4e-5984.67Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME
        I +RWIMGNASGGESA++AGEKA+AF+DAAW FIEQKS+LPENPP  +DSIVQVDSQ TRKENE W ILKD GKFVP++K+MELR KLIKFMEDHIYPME
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPME

Query:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        NEFYKLAQSS RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  NEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

A0A6J1GUW2 probable acyl-CoA dehydrogenase IBR33.8e-5782.14Show/hide
Query:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILK---DEGKFVPSKKVMELRNKLIKFMEDHIY
        I +RWIMGNASGGESARIAG+KA+AF+D+AW FIEQKS+LPENPPF  DSIVQVDSQ T KENE W++ K   D GKFVP+KKVM+LRNKLIKFMEDHIY
Subjt:  IVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILK---DEGKFVPSKKVMELRNKLIKFMEDHIY

Query:  PMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        PMENEFYKLAQS  RW IHPEEEKLKEMAKKEGLWNLWIP
Subjt:  PMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

SwissProt top hitse value%identityAlignment
Q5ZHT1 Acyl-CoA dehydrogenase family member 115.4e-0844.78Show/hide
Query:  FVPSKKVMELRNKLIKFMEDHIYPMENE----FYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
        F  S+K  E+  K+ +FM+ H+YP E E    + K   + +RW   P  E+LKEMAK EGLWNL++P
Subjt:  FVPSKKVMELRNKLIKFMEDHIYPMENE----FYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

Q6JQN1 Acyl-CoA dehydrogenase family member 105.4e-0829.09Show/hide
Query:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKS--VLPENP--------------------PFASDSIVQVDSQDTRKENEGWAILKDEG
        ++L+ +  R + G AS    A   G+  +   + AW+F  ++   V  E P                    P  S S   V        + G  ++  E 
Subjt:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKS--VLPENP--------------------PFASDSIVQVDSQDTRKENEGWAILKDEG

Query:  KFVPSKKVMELRNKLIKFMEDHIYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV
           P   V EL ++L  FME  +YP E E      S+ RW+  P  E LKE AK EGLWNL++P+
Subjt:  KFVPSKKVMELRNKLIKFMEDHIYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV

Q80XL6 Acyl-CoA dehydrogenase family member 113.0e-0628.66Show/hide
Query:  FMLPSFSELLQSLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMEL
        FM  SF + L  + + +  R++MGN S  +S                 F+   +V P      +++ +Q+ S+ T +     A  K +  F  S++  E+
Subjt:  FMLPSFSELLQSLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMEL

Query:  RNKLIKFMEDHIYPMENE----FYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP
          ++ +FM+ H++P E E    + +   S+++W      EKLKEMAK EGLWNL++P
Subjt:  RNKLIKFMEDHIYPMENE----FYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIP

Q8K370 Acyl-CoA dehydrogenase family member 107.1e-0840.26Show/hide
Query:  ENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV
        E +G  ++  EG    S  V +L  +L++F+E  +YP+E E  +   S+ RW+  P  E LKE AK EGLWNL++P+
Subjt:  ENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV

Q8RWZ3 Probable acyl-CoA dehydrogenase IBR31.8e-3552.45Show/hide
Query:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDH
        S+   + +RW+MGNAS GE AR  G +A+  +++A  +I +++VLPE+PP      VQ D   + +     +++   G+F+P++KV+ELR KLIKFME H
Subjt:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDH

Query:  IYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV
        IYPMENEF KLAQS  RW +HP+EEKLKEMAK+EGLWNL++PV
Subjt:  IYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV

Arabidopsis top hitse value%identityAlignment
AT3G06810.1 acyl-CoA dehydrogenase-related1.3e-3652.45Show/hide
Query:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDH
        S+   + +RW+MGNAS GE AR  G +A+  +++A  +I +++VLPE+PP      VQ D   + +     +++   G+F+P++KV+ELR KLIKFME H
Subjt:  SLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRKENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDH

Query:  IYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV
        IYPMENEF KLAQS  RW +HP+EEKLKEMAK+EGLWNL++PV
Subjt:  IYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCGGTTTGGGAAAATTCGGGCTTCCAGAAAATTACTGTAAGCGACAGGGAAAACCATGGCCCTTTTCTGCTTGGAAGTTTTATGTTGCCTTCATTTTCT
GAGCTGCTGCAATCTTTGCTGGAATTTATAGTCAATCGATGGATTATGGGAAATGCATCAGGAGGTGAGAGTGCTCGGATTGCTGGAGAAAAAGCTGATGCTTTT
ATGGATGCCGCTTGGGAATTTATTGAACAAAAATCTGTGCTTCCTGAAAATCCTCCATTTGCTTCAGACTCGATTGTACAAGTTGATTCACAAGATACTAGGAAG
GAGAATGAAGGATGGGCCATTCTCAAAGATGAAGGAAAGTTTGTCCCCAGTAAAAAGGTCATGGAGTTGAGAAACAAGTTGATTAAGTTCATGGAAGATCATATA
TACCCTATGGAAAATGAATTTTACAAACTTGCTCAATCTTCCAAACGTTGGAACATTCACCCAGAGGAAGAGAAACTGAAGGAGATGGCTAAGAAAGAAGGCTTG
TGGAACTTGTGGATACCTGTTTGGATTTTGGCTTCTCTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTCGGTTTGGGAAAATTCGGGCTTCCAGAAAATTACTGTAAGCGACAGGGAAAACCATGGCCCTTTTCTGCTTGGAAGTTTTATGTTGCCTTCATTTTCT
GAGCTGCTGCAATCTTTGCTGGAATTTATAGTCAATCGATGGATTATGGGAAATGCATCAGGAGGTGAGAGTGCTCGGATTGCTGGAGAAAAAGCTGATGCTTTT
ATGGATGCCGCTTGGGAATTTATTGAACAAAAATCTGTGCTTCCTGAAAATCCTCCATTTGCTTCAGACTCGATTGTACAAGTTGATTCACAAGATACTAGGAAG
GAGAATGAAGGATGGGCCATTCTCAAAGATGAAGGAAAGTTTGTCCCCAGTAAAAAGGTCATGGAGTTGAGAAACAAGTTGATTAAGTTCATGGAAGATCATATA
TACCCTATGGAAAATGAATTTTACAAACTTGCTCAATCTTCCAAACGTTGGAACATTCACCCAGAGGAAGAGAAACTGAAGGAGATGGCTAAGAAAGAAGGCTTG
TGGAACTTGTGGATACCTGTTTGGATTTTGGCTTCTCTCATTTGA
Protein sequenceShow/hide protein sequence
MLSVWENSGFQKITVSDRENHGPFLLGSFMLPSFSELLQSLLEFIVNRWIMGNASGGESARIAGEKADAFMDAAWEFIEQKSVLPENPPFASDSIVQVDSQDTRK
ENEGWAILKDEGKFVPSKKVMELRNKLIKFMEDHIYPMENEFYKLAQSSKRWNIHPEEEKLKEMAKKEGLWNLWIPVWILASLI