; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G015260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionacyl-CoA dehydrogenase-related
Genome locationCmo_Chr06:10831849..10832847
RNA-Seq ExpressionCmoCh06G015260
SyntenyCmoCh06G015260
Gene Ontology termsGO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal
IPR036250 - Acyl-CoA dehydrogenase-like, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597547.1 putative pectinesterase/pectinesterase inhibitor 21, partial [Cucurbita argyrosperma subsp. sororia]9.0e-41100Show/hide
Query:  VLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAKSFGGLSFEN
        VLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAKSFGGLSFEN
Subjt:  VLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAKSFGGLSFEN

XP_011651064.1 probable acyl-CoA dehydrogenase IBR3 [Cucumis sativus]4.3e-3587.37Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA  MALQILDMAMQVHGAGGLSS TV AHLWAAART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

XP_022137934.1 probable acyl-CoA dehydrogenase IBR3 [Momordica charantia]4.3e-3585.26Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQ+LDMAMQVHGAGGLSS TV +HLWA ART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

XP_022955811.1 probable acyl-CoA dehydrogenase IBR3 [Cucurbita moschata]5.7e-3589.01Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQILDMAMQVHGAGGLSS TV AHLWA  RT RI DGPDEVHLGTIAK
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

XP_038897612.1 probable acyl-CoA dehydrogenase IBR3 [Benincasa hispida]1.1e-3587.37Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQILDMAMQVHGAGGLSS TV AHLWA+ART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

TrEMBL top hitse value%identityAlignment
A0A0A0L5U9 Uncharacterized protein2.1e-3587.37Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA  MALQILDMAMQVHGAGGLSS TV AHLWAAART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

A0A5D3CXJ9 Putative acyl-CoA dehydrogenase IBR3 isoform X18.0e-3585.26Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA  MALQILDMAMQVHGAGGLSS TV +HLWA ART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

A0A6J1C8N7 probable acyl-CoA dehydrogenase IBR32.1e-3585.26Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQ+LDMAMQVHGAGGLSS TV +HLWA ART RI DGPDEVHLGTIAK
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

A0A6J1GUW2 probable acyl-CoA dehydrogenase IBR32.7e-3589.01Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQILDMAMQVHGAGGLSS TV AHLWA  RT RI DGPDEVHLGTIAK
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

A0A6J1IX24 probable acyl-CoA dehydrogenase IBR32.7e-3589.01Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        KCRV+LE TRLLVLEAADQLDRLGNKKARGTIAM KVAA NMALQILDMAMQVHGAGGLSS TV AHLWA  RT RI DGPDEVHLGTIAK
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

SwissProt top hitse value%identityAlignment
B3DMA2 Acyl-CoA dehydrogenase family member 111.6e-1650.55Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        K R+ +E  RLL L+AA  +D LG+  AR  IAM KVAA     +I D A+QVHG  G+S     A+++A  RT R+ DGPDEVHL  IAK
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

Q5ZHT1 Acyl-CoA dehydrogenase family member 111.1e-1748.35Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        +CR+ +E  RLL L+ A ++D LGN+KAR  +AMTKV      L+++D A+QV G  G+S     A ++A  RT R+ DGPDEVHL TIA+
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

Q6JQN1 Acyl-CoA dehydrogenase family member 105.2e-1550.56Show/hide
Query:  RVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        RV++E  RLLVL AA  +D  GNK A   IAM K+ A +MA +++D A+Q  GA GLSS    A  +  AR  R  DGPDEVH  T+AK
Subjt:  RVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

Q80XL6 Acyl-CoA dehydrogenase family member 111.2e-1650.55Show/hide
Query:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        K R+ +E  RLL L+AA  +D LG+  AR  IAM KVAA     +I D A+QVHG  G+S     A+++A  RT R+ DGPDEVHL  IAK
Subjt:  KCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

Q8RWZ3 Probable acyl-CoA dehydrogenase IBR39.4e-3374.74Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   K RV+LEGTRLLVLEAAD LD+ GNKKARG +AM KVAA NMAL++LD A+QVHGA G+SS TV AHLWA ART RI DGPDEVHLGTI K
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK

Arabidopsis top hitse value%identityAlignment
AT3G06810.1 acyl-CoA dehydrogenase-related6.7e-3474.74Show/hide
Query:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK
        S   K RV+LEGTRLLVLEAAD LD+ GNKKARG +AM KVAA NMAL++LD A+QVHGA G+SS TV AHLWA ART RI DGPDEVHLGTI K
Subjt:  SSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEVHLGTIAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCTGTCGATGGGGATCGAGATGAAAAGATGAGATGCGACGTTGCATTGAGAGACCTTGGCTCGAGTAGAGGCAAGTGTCGTGTGAAACTTGAGGGAACGAGATT
GCTAGTCTTGGAAGCAGCTGATCAGTTAGATCGGCTAGGAAACAAGAAAGCACGAGGGACGATTGCAATGACCAAGGTTGCAGCAACCAATATGGCATTGCAAATTCTGG
ACATGGCAATGCAAGTTCATGGTGCAGGTGGCTTATCTTCTGGCACTGTTCATGCTCATCTCTGGGCTGCTGCAAGAACCTTCAGAATACCAGATGGCCCTGATGAAGTT
CATTTAGGAACCATCGCCAAGAGCTTCGGAGGGCTAAGCTTTGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCTGTCGATGGGGATCGAGATGAAAAGATGAGATGCGACGTTGCATTGAGAGACCTTGGCTCGAGTAGAGGCAAGTGTCGTGTGAAACTTGAGGGAACGAGATT
GCTAGTCTTGGAAGCAGCTGATCAGTTAGATCGGCTAGGAAACAAGAAAGCACGAGGGACGATTGCAATGACCAAGGTTGCAGCAACCAATATGGCATTGCAAATTCTGG
ACATGGCAATGCAAGTTCATGGTGCAGGTGGCTTATCTTCTGGCACTGTTCATGCTCATCTCTGGGCTGCTGCAAGAACCTTCAGAATACCAGATGGCCCTGATGAAGTT
CATTTAGGAACCATCGCCAAGAGCTTCGGAGGGCTAAGCTTTGAAAATTGA
Protein sequenceShow/hide protein sequence
MDPVDGDRDEKMRCDVALRDLGSSRGKCRVKLEGTRLLVLEAADQLDRLGNKKARGTIAMTKVAATNMALQILDMAMQVHGAGGLSSGTVHAHLWAAARTFRIPDGPDEV
HLGTIAKSFGGLSFEN