CuGenDBv2

Gene ID	CmoCh06G015610
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Phosphatase 2C (PP2C)-like protein
Genome location	Cmo_Chr06:11002632..11004264
RNA-Seq Expression	CmoCh06G015610
Synteny	CmoCh06G015610
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597576.1 Phytochrome B, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-66

82.25

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

KAG7029019.1 hypothetical protein SDJN02_10202, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-66

82.25

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Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

XP_022938319.1 uncharacterized protein LOC111444453 isoform X1 [Cucurbita moschata]

3.3e-66

82.25

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Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

XP_022938324.1 uncharacterized protein LOC111444453 isoform X2 [Cucurbita moschata]

3.3e-66

82.25

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

XP_023540781.1 uncharacterized protein LOC111801047 isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-64

80.95

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Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RN IYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHL+DAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA

TrEMBL top hits

e value

%identity

Alignment

A0A5D3D194 Phosphatase 2C (PP2C)-like protein

1.6e-58

73.96

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RN IYARVDSALHR+RDTSE VQ+FAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDH LQDA 
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
         NSSEIFQSSIFTQQYVD+VL EEREKM+CCSI+YKYPV+SSQNY+YGGILLAGFVVYFLVIFFSSP R
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

A0A6J1FDQ9 uncharacterized protein LOC111444453 isoform X1

1.6e-66

82.25

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

A0A6J1FDR2 uncharacterized protein LOC111444453 isoform X2

1.6e-66

82.25

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
        WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

A0A6J1I8N6 uncharacterized protein LOC111470678 isoform X1

8.3e-63

79.76

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Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RN IYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA
         NSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQN+MYGGILLAGFVVYFLVIF+SSPA
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA

A0A6J1IA89 uncharacterized protein LOC111470678 isoform X2

8.3e-63

79.76

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RN IYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT                              DNLEEQLVDLSSLLYDHHLQDAD
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA
         NSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQN+MYGGILLAGFVVYFLVIF+SSPA
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16180.2 unknown protein

8.2e-47

60.36

Show/hide

Query:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD
        RNTIYARVDSAL ++R+TSEAVQ+FA+E+LKTPLGEPVK KKNKT T                              D +EEQLVDLSSLLYDH L DA 
Subjt:  RNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTT------------------------------DNLEEQLVDLSSLLYDHHLQDAD

Query:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYP--VESSQNYMYGGILLAGFVVYFLVIFFSSP
         NSSEI Q+++FTQQYV++VL  ERE M+CC I+YKY   V+S Q  +YGGIL+AGF+VYFLVIFFSSP
Subjt:  WNSSEIFQSSIFTQQYVDYVLIEEREKMKCCSIQYKYP--VESSQNYMYGGILLAGFVVYFLVIFFSSP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTTCCCGTTTTCGACCTCCTTCCCCGACAGAGGAACACAATATATGCACGTGTAGATTCAGCTCTTCACCGAGTCCGAGATACATCAGAGGCTGTCCAATCCTTTGC
AGCAGAACATCTAAAAACTCCACTTGGCGAACCAGTAAAAGGAAAGAAGAACAAGACAACAACCGATAACCTCGAGGAACAGCTCGTGGATCTGTCATCGCTATTATACG
ACCATCATTTACAAGATGCAGATTGGAACAGCTCGGAAATATTCCAGAGCTCCATTTTTACACAGCAGTACGTGGACTATGTGTTGATCGAAGAGAGGGAGAAGATGAAG
TGCTGCAGCATTCAGTATAAATACCCAGTGGAGTCGTCTCAGAATTACATGTATGGAGGAATTCTTCTAGCTGGGTTTGTAGTTTACTTTCTTGTCATCTTCTTTTCATC
ACCAGCCCGCTAA

mRNA sequence

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Protein sequence

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MFPVFDLLPRQRNTIYARVDSALHRVRDTSEAVQSFAAEHLKTPLGEPVKGKKNKTTTDNLEEQLVDLSSLLYDHHLQDADWNSSEIFQSSIFTQQYVDYVLIEEREKMK
CCSIQYKYPVESSQNYMYGGILLAGFVVYFLVIFFSSPAR

CmoCh06G015610 (gene) of Cucurbita moschata (Rifu) v1 genome