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CmoCh06G015680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionER membrane protein complex subunit 6
Genome locationCmo_Chr06:11042625..11047194
RNA-Seq ExpressionCmoCh06G015680
SyntenyCmoCh06G015680
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]1.0e-46100Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
KAG7029026.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-46100Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]1.6e-4291.26Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]1.0e-46100Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
XP_022972030.1 ER membrane protein complex subunit 6 [Cucurbita maxima]1.8e-4699.03Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDD+PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 64.1e-4189.32Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A1S3BQB0 ER membrane protein complex subunit 61.9e-4190.29Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL 
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1CBS9 ER membrane protein complex subunit 67.5e-4391.26Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1FFH8 ER membrane protein complex subunit 65.0e-47100Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
A0A6J1I7D9 ER membrane protein complex subunit 68.6e-4799.03Show/hide
Query:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSNASEKKSSDAVDD+PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLM
        GLM
Subjt:  GLM
SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 68.4e-0736.59Show/hide
Query:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
        P ++   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL
Subjt:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
Q68EU8 ER membrane protein complex subunit 67.6e-0841.33Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
        ++ N  ++ Y RT +S + G  AGILG TSL GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
Q6GLC5 ER membrane protein complex subunit 61.3e-0740Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
        ++ N  ++ Y RT +S + G  AGILG T+L GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
Q9BV81 ER membrane protein complex subunit 67.6e-0837.8Show/hide
Query:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
        P ++   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL
Subjt:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
Q9CQW0 ER membrane protein complex subunit 67.6e-0837.8Show/hide
Query:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
        P ++   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL
Subjt:  PILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGL
Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein5.0e-3167.71Show/hide
Query:  ASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM
        +SEK+S D + DIP  +AENLQNNLK+I  SRTFLSII GV+AGI+GF  L GF+FYF+VM ITS+GL AKAGFS   YF+SWN++L DGFL GLM
Subjt:  ASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGATATTCCTCCAATGCTTCCGAGAAGAAATCGTCTGACGCGGTCGACGATATACCGATCTTGAATGCTGAAAATTTGCAAAACAACTTGAAGATTATATACTA
CAGCCGGACGTTTTTGTCTATTATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTAGCCTGACTGGATTTATATTCTATTTCCTAGTCATGGCAATTACTTCAATTG
GACTTGCAGCTAAGGCTGGATTCTCCTTTCATTCGTATTTTGAAAGCTGGAACCAGATTCTACTTGATGGCTTTCTGAGTGGCCTTATGTTCTTGAGATTCATCAGAAAA
TGTGAAATTGCACGGATTGTAGGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTAACCCAGAAATTATTTTGTAGGCTAACGGGAGAGCTCAACTCGACAAGAACAAGACTCACAGCTGCCGCTGTTCGTAGACAAAGCCTTACCTTCCTCCCCTTGGATC
GATCGCAATCAACTGGTAATTTACTGTTATTATTCTTCTGAAATTCAGATCATACAAACAATCCGCTACTGCATTTTGGTACTTTTCTCTCTGTTTCATAGATTTGGATC
CATTAGTTGCAGAAGATCCGATCAGACGCCGTTCGAAGCTATGGCTGGATATTCCTCCAATGCTTCCGAGAAGAAATCGTCTGACGCGGTCGACGATATACCGATCTTGA
ATGCTGAAAATTTGCAAAACAACTTGAAGATTATATACTACAGCCGGACGTTTTTGTCTATTATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTAGCCTGACTGGA
TTTATATTCTATTTCCTAGTCATGGCAATTACTTCAATTGGACTTGCAGCTAAGGCTGGATTCTCCTTTCATTCGTATTTTGAAAGCTGGAACCAGATTCTACTTGATGG
CTTTCTGAGTGGCCTTATGTTCTTGAGATTCATCAGAAAATGTGAAATTGCACGGATTGTAGGGGTGTGA
Protein sequenceShow/hide protein sequence
MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMFLRFIRK
CEIARIVGV