CuGenDBv2

Gene ID	CmoCh06G015740
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Detected protein of confused Function
Genome location	Cmo_Chr06:11086042..11087753
RNA-Seq Expression	CmoCh06G015740
Synteny	CmoCh06G015740
Gene Ontology terms	NA
InterPro domains	IPR008011 - Complex 1 LYR protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597586.1 Hydroxyproline O-galactosyltransferase GALT3, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-40

100

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Query:  TALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        TALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
Subjt:  TALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

XP_022138283.1 uncharacterized protein LOC111009499 [Momordica charantia]

4.2e-40

93.41

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNT+LVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

XP_022964695.1 uncharacterized protein LOC111464671 [Cucurbita moschata]

1.2e-42

100

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

XP_022972196.1 uncharacterized protein LOC111470803 [Cucurbita maxima]

2.7e-42

98.9

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

XP_038878962.1 uncharacterized protein LOC120071039 [Benincasa hispida]

1.4e-38

90.11

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNT+L+VSMV+QQFRKNM ETDPEKIQKLKDDAARGLINHILYESER++GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYB1 uncharacterized protein LOC103483919

2.5e-38

85.71

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNT+L+V MV+QQF+KNMHETDPEKIQK+KD+AARGLINH+LYE ER++G+KLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

A0A5A7UD86 Complex1_LYR domain-containing protein

2.5e-38

85.71

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNT+L+V MV+QQF+KNMHETDPEKIQK+KD+AARGLINH+LYE ER++G+KLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

A0A6J1C9Q7 uncharacterized protein LOC111009499

2.0e-40

93.41

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNT+LVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

A0A6J1HLJ6 uncharacterized protein LOC111464671

5.8e-43

100

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

A0A6J1I5B4 uncharacterized protein LOC111470803

1.3e-42

98.9

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G17300.1 unknown protein

4.2e-38

81.32

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        MPSLQT+LPPELANNV+RLYRECLRRAKFIG +QHNT+LVV MV+QQF+K+M+ETDPEKIQKLKDDAARGLINH+L+ES +LTG K+SQ S
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

AT3G17300.2 unknown protein

4.0e-20

77.59

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Query:  QHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS
        QHNT+LVV MV+QQF+K+M+ETDPEKIQKLKDDAARGLINH+L+ES +LTG K+SQ S
Subjt:  QHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

Sequences

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CDS sequence

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mRNA sequence

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ATGCCATCCCTACAGACTGCTCTACCTCCTGAACTTGCGAATAATGTCATTAGGCTTTACCGTGAGTGCCTTCGAAGAGCCAAGTTTATCGGTCATCGGCAACATAACAC
CGATCTTGTTGTTAGTATGGTGAAGCAACAATTCAGAAAAAACATGCATGAGACTGATCCAGAGAAGATTCAGAAGTTGAAAGATGATGCGGCAAGGGGACTCATAAACC
ATATTCTATACGAATCCGAGAGACTGACAGGTCGAAAACTCAGCCAAAGTTCTTGATGTTATGGAGAACGACATCGAGTAAAAGGTCCCCTCCCTTTGAAACTCTAGATA
TTGCAGGAAAATAAGGTGGCTGATCATTAAAGTACTCCTTGGATGTTATTTTTGCTTTTAACTTCCCCATTTCTACGATTTGTTCAAGGAAATCGTCCACTTTACAGTAA
AAGTTGAACGTTTCCCCATCAACAATCTGCATTTCAGTTCTACATTTGTGTTTGATTTTTTAAGTTAAAAGAGGTCATTGATATTTAATGTTTGTTTTGTGGCTGACGTA
TACTGTTGTAATCCAATCTTTAAGTTAATTATTTGTTAGTTCAC

Protein sequence

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MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLTGRKLSQSS

CmoCh06G015740 (gene) of Cucurbita moschata (Rifu) v1 genome