CuGenDBv2

Gene ID	CmoCh06G015810
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Genome location	Cmo_Chr06:11109258..11109941
RNA-Seq Expression	CmoCh06G015810
Synteny	CmoCh06G015810
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597592.1 hypothetical protein SDJN03_10772, partial [Cucurbita argyrosperma subsp. sororia]

7.1e-121

99.56

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEEQKLQDWISSILEPK RNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

KAG7029036.1 hypothetical protein SDJN02_10219, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.3e-121

99.12

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARA+AEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEEQKLQDWISSILEPK RNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

XP_022943680.1 uncharacterized protein LOC111448356 [Cucurbita moschata]

1.4e-121

100

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEEQKLQDWISSILEPKTRNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

XP_022972158.1 uncharacterized protein LOC111470781 [Cucurbita maxima]

3.0e-119

97.8

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNC+LRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNE+ NSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEE KLQ+WISSILEPKTRNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

XP_023540291.1 uncharacterized protein LOC111800711 [Cucurbita pepo subsp. pepo]

3.2e-121

99.56

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLG+CQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEEQKLQDWISSILEPKTRNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5G4 Uncharacterized protein

2.0e-84

77.57

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        +QSNSISHCQ+CGI+QS CWILHNVR KA+FRRLCTNCVL++N+SRFCP+CFDVY+DST PPSH RVMCFRCPSISHLSC+SFRFSSTFLCPLCSDP F 
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFD F SGG  LCQSE  VA LAG+++  KS KA+VAAARV+AQSMRRAA DARAVAEMKIKNAAFAKKQATLALE+LAYL L+EKD N ++ SNGDAV 
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQ--KLQD
         E  VEE+  KLQ+
Subjt:  GEMTVEEQ--KLQD

A0A5A7U9X0 DNA binding protein

8.3e-83

77.03

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        +Q+NSISHCQECGI+QS CWILHNVR KA+FRRLCTNCVL++N+SRFCP+CFDVY+DST PPSH RVMC+RCPSISHLSC+SFRFSSTFLCPLCSDP F 
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFD F S G+ L QSE  VA LAG+++  KS KA+VAAARV+AQSMRRAA DARAVAEMKIKNAAFAKKQATLALE+LAYL L+EKD N ++ SNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQK
         E  VEE++
Subjt:  GEMTVEEQK

A0A6J1FY52 uncharacterized protein LOC111448356

7.0e-122

100

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEEQKLQDWISSILEPKTRNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

A0A6J1I928 uncharacterized protein LOC111470781

1.5e-119

97.8

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNC+LRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNE+ NSNGDAVA
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQKLQDWISSILEPKTRNQTQ
        GEMTVEE KLQ+WISSILEPKTRNQTQ
Subjt:  GEMTVEEQKLQDWISSILEPKTRNQTQ

A0A6J1IXP5 uncharacterized protein LOC111479468

6.4e-83

74.67

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Query:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT
        +QSNSIS+C ECGI+QS CWILHNVR KASFRRLCTNCVL+NN+SRFCP+CFD+YDDST P SHQRVMCFRCPSISH+SC SFRFSSTFLCPLCSDP F 
Subjt:  MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFT

Query:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA
        FFD F SG L   QSE AV+ LAGRD  GKSAKA+VAAARV AQSMRRAAADARAVAEMK +NA FAKKQATLALERLAYL L+EKD N +A +NG+A A
Subjt:  FFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVA

Query:  GEMTVEEQ-KLQ-DWISSILEPKTRNQTQ
        G +  EE+ +LQ + +++ILE    NQTQ
Subjt:  GEMTVEEQ-KLQ-DWISSILEPKTRNQTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G09520.1 LOCATED IN: chloroplast

6.0e-25

37.97

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Query:  SNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCF--RCPSISHLSCISFRFSSTFLCPLCSDP-SF
        +NS   C +CG   S+ W++H VR++AS R  CT+C+LRN+ + FCP CF +YD S  PPS +RV C    C S++H+ C       ++LCP C DP SF
Subjt:  SNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCF--RCPSISHLSCISFRFSSTFLCPLCSDP-SF

Query:  TFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEK
        +FF                V     R +    ++A + AA++AA SM +A   A+   + + K AA AKK+A  ALE++  L+ +EK
Subjt:  TFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEK

AT3G17460.1 PHD finger family protein

3.6e-14

33.7

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Query:  QECGI-TQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFS--------------STFLCPLC
        +EC +  + E   +H V    +FRRLCT+C+L+     FC VCF+++D+  A P   R++C  CPS +HLSC +   S              S+F C  C
Subjt:  QECGI-TQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFS--------------STFLCPLC

Query:  SDPSFTFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERL
        S+P+FTFF           +S           ++ KSA A+VAA  ++  +M +A A  +  A  KI  A  AK +A  AL  L
Subjt:  SDPSFTFFDCFGSGGLGLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCACTCAATCCGAGTGTTGGATCCTCCACAATGTCCGTGTCAAAGCGTCCTTCCGTCGTCTCTGTACCAA
TTGCGTCCTCAGGAACAATATCTCCCGTTTCTGTCCCGTGTGCTTCGATGTTTATGACGATTCGACTGCGCCGCCGTCTCATCAGCGAGTTATGTGCTTCAGATGTCCTT
CGATCTCTCATCTCTCTTGCATTTCTTTTCGTTTTTCTTCTACCTTCCTTTGCCCTCTCTGCTCTGATCCTTCTTTTACCTTCTTCGACTGTTTCGGCTCCGGCGGCCTT
GGCCTTTGCCAATCGGAGTACGCCGTCGCTACTTTGGCCGGGAGAGACATTAGTGGTAAATCGGCTAAGGCGGTTGTCGCAGCGGCTCGTGTCGCCGCTCAATCCATGCG
GAGAGCGGCAGCTGACGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCGTTTGCCAAGAAGCAGGCTACTCTCGCATTGGAGCGGCTTGCTTATCTTGAGCTAG
AGGAGAAAGATGGAAATGAACATGCTAATAGTAACGGAGATGCTGTGGCCGGTGAGATGACGGTGGAAGAACAGAAGCTGCAGGACTGGATATCTTCGATTCTCGAGCCT
AAGACGCGGAATCAAACTCAGTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MQSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGL
GLCQSEYAVATLAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLELEEKDGNEHANSNGDAVAGEMTVEEQKLQDWISSILEP
KTRNQTQ

CmoCh06G015810 (gene) of Cucurbita moschata (Rifu) v1 genome