; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G015860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationCmo_Chr06:11131944..11132947
RNA-Seq ExpressionCmoCh06G015860
SyntenyCmoCh06G015860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597597.1 hypothetical protein SDJN03_10777, partial [Cucurbita argyrosperma subsp. sororia]2.8e-7496.97Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
        MASIRVRRRRII+PAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE EKDRSSETWTEWAKKKISGGLGLRNELREDGV+KIENV 
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV

Query:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
        SE GQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
Subjt:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL

XP_022945786.1 late embryogenesis abundant protein D-29-like [Cucurbita moschata]7.8e-77100Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
        MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV

Query:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
        SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
Subjt:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL

XP_022972078.1 late embryogenesis abundant protein D-29-like [Cucurbita maxima]2.8e-4261.58Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEM---------------KRKMAAKEETE-----KDRSSET----WTEWAKK
        M SIRVRRRRII PAVAVAVVVLVFMVSF RSGSVGHMPSTEEEGRDYQE+                 ++   EE +     K + S        EWAKK
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEM---------------KRKMAAKEETE-----KDRSSET----WTEWAKK

Query:  KISGGLGLR------NELREDGVNKIENVVSE--------AGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSE
        KISGG G++      ++  +   +KIEN  S+        AGQYGAEKGREAEDMAAEKAAE A+EMKAKGKAAEETTEKGFV GK+KSERIKDD+VGSE
Subjt:  KISGGLGLR------NELREDGVNKIENVVSE--------AGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSE

Query:  DEL
        DEL
Subjt:  DEL

XP_023540691.1 late embryogenesis abundant protein D-29-like [Cucurbita pepo subsp. pepo]3.0e-6892.12Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
        MASIRVRRRRIILPAVAVAVVVL+FMVSF RSGSVGHMPSTEEEGRDYQEMKRKMAAKEE EKDRSSETWTEWAKKKISGGLGLRNELR DGVNKIENV 
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV

Query:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
        SEAGQYGAEKGREAEDMA       AEEMKAKG+AAEETTEKGFVAGKKKSERIKDDVVGSEDEL
Subjt:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL

XP_038906718.1 late embryogenesis abundant protein D-29 [Benincasa hispida]9.7e-3555.91Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDG--------
        MA IRV RRRI LPAVAV VVV+VFMV F  SGSVGHMPST EE RDYQEMK K AAK+E E+D+S+ETWTEWAK+KISGGLGL+NE REDG        
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDG--------

Query:  --------VNKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEM-----KAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
                 +KI+NV SEAGQY AEK +E +D A EKA E  ++       A+G AAE+TTE    A +K  E+  +    ++D++
Subjt:  --------VNKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEM-----KAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL

TrEMBL top hitse value%identityAlignment
A0A5A7UA73 Late embryogenesis abundant protein D-293.9e-2952.22Show/hide
Query:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV
        +SIRV RRRI LPAVA+AV  V+LVFMV+   SGSVGHMPSTEE+ RDY EMK K+AAK++  EKD+++ETWTEWAK+KI+GGLGL+NE  ED     GV
Subjt:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV

Query:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI
                       +KI+NV S  GQYG EK  E + MAAEKA E  ++    G    +AAE+  EK + A K+  +++
Subjt:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI

A0A5D3BZE2 Late embryogenesis abundant protein D-293.9e-2952.22Show/hide
Query:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV
        +SIRV RRRI LPAVA+AV  V+LVFMV+   SGSVGHMPSTEE+ RDY EMK K+AAK++  EKD+++ETWTEWAK+KI+GGLGL+NE  ED     GV
Subjt:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV

Query:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI
                       +KI+NV S  GQYG EK  E + MAAEKA E  ++    G    +AAE+  EK + A K+  +++
Subjt:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI

A0A6J1G1V4 late embryogenesis abundant protein D-29-like3.8e-77100Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
        MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVV

Query:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
        SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL
Subjt:  SEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL

A0A6J1I8U6 late embryogenesis abundant protein D-29-like1.4e-4261.58Show/hide
Query:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEM---------------KRKMAAKEETE-----KDRSSET----WTEWAKK
        M SIRVRRRRII PAVAVAVVVLVFMVSF RSGSVGHMPSTEEEGRDYQE+                 ++   EE +     K + S        EWAKK
Subjt:  MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEM---------------KRKMAAKEETE-----KDRSSET----WTEWAKK

Query:  KISGGLGLR------NELREDGVNKIENVVSE--------AGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSE
        KISGG G++      ++  +   +KIEN  S+        AGQYGAEKGREAEDMAAEKAAE A+EMKAKGKAAEETTEKGFV GK+KSERIKDD+VGSE
Subjt:  KISGGLGLR------NELREDGVNKIENVVSE--------AGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSE

Query:  DEL
        DEL
Subjt:  DEL

E5GC45 Late embryogenesis abundant protein D-293.9e-2952.22Show/hide
Query:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV
        +SIRV RRRI LPAVA+AV  V+LVFMV+   SGSVGHMPSTEE+ RDY EMK K+AAK++  EKD+++ETWTEWAK+KI+GGLGL+NE  ED     GV
Subjt:  ASIRVRRRRIILPAVAVAV--VVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEE-TEKDRSSETWTEWAKKKISGGLGLRNELRED-----GV

Query:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI
                       +KI+NV S  GQYG EK  E + MAAEKA E  ++    G    +AAE+  EK + A K+  +++
Subjt:  ---------------NKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKG----KAAEETTEKGFVAGKKKSERI

SwissProt top hitse value%identityAlignment
P13940 Late embryogenesis abundant protein D-294.4e-0628.43Show/hide
Query:  VVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMK------------RKMAAKEETE-----------------KDRSS----------ETWTEWAKKKISG
        +V LV  V+  R  +V HMPST+E+ RDY ++K            R   AK+E +                 KDR+S          E+WTEWAK+KIS 
Subjt:  VVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMK------------RKMAAKEETE-----------------KDRSS----------ETWTEWAKKKISG

Query:  GLGLRNELREDG----------------VNKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAE---ETTEKGFVAGKKKSERIKDDVVGS
        GLG + +    G                 +K++++ S AG+Y A K ++ +D A +K  +   +  AKGK++E    TTEK         E      + +
Subjt:  GLGLRNELREDG----------------VNKIENVVSEAGQYGAEKGREAEDMAAEKAAETAEEMKAKGKAAE---ETTEKGFVAGKKKSERIKDDVVGS

Query:  EDEL
        ++++
Subjt:  EDEL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATACGAGTTCGCCGGCGCCGGATAATTCTCCCGGCGGTGGCGGTGGCAGTGGTGGTGCTGGTTTTTATGGTGAGTTTTGGCCGGAGCGGGAGCGTGGGACA
CATGCCGTCGACGGAGGAGGAGGGTCGAGATTACCAGGAAATGAAGAGAAAGATGGCGGCGAAAGAAGAAACGGAAAAAGACCGGTCGTCGGAGACTTGGACGGAATGGG
CAAAAAAGAAGATCTCCGGTGGACTTGGACTGAGAAATGAACTCCGGGAAGACGGCGTTAACAAAATCGAGAATGTCGTCTCAGAGGCGGGACAATATGGGGCTGAGAAG
GGCAGAGAAGCGGAGGACATGGCGGCGGAGAAGGCAGCAGAAACGGCGGAGGAGATGAAGGCGAAGGGGAAGGCGGCGGAGGAGACGACGGAGAAAGGGTTTGTGGCGGG
AAAGAAGAAGTCGGAGAGGATAAAAGACGACGTGGTTGGGTCGGAGGACGAGCTGTAA
mRNA sequenceShow/hide mRNA sequence
CCGGTACCTAATTTTCTTCACAGAGATTAAACACAATTTCACAATTAATCGTTCCAATGGCTTCAATACGAGTTCGCCGGCGCCGGATAATTCTCCCGGCGGTGGCGGTG
GCAGTGGTGGTGCTGGTTTTTATGGTGAGTTTTGGCCGGAGCGGGAGCGTGGGACACATGCCGTCGACGGAGGAGGAGGGTCGAGATTACCAGGAAATGAAGAGAAAGAT
GGCGGCGAAAGAAGAAACGGAAAAAGACCGGTCGTCGGAGACTTGGACGGAATGGGCAAAAAAGAAGATCTCCGGTGGACTTGGACTGAGAAATGAACTCCGGGAAGACG
GCGTTAACAAAATCGAGAATGTCGTCTCAGAGGCGGGACAATATGGGGCTGAGAAGGGCAGAGAAGCGGAGGACATGGCGGCGGAGAAGGCAGCAGAAACGGCGGAGGAG
ATGAAGGCGAAGGGGAAGGCGGCGGAGGAGACGACGGAGAAAGGGTTTGTGGCGGGAAAGAAGAAGTCGGAGAGGATAAAAGACGACGTGGTTGGGTCGGAGGACGAGCT
GTAATTGAGAAATTTATAATGTAATTTTCTAATTTTTATTTTTAAAATAAATAGTTAAAAATAAAACAAATTTGTTAAATATAAAATTAAAAATTAAGAAAGTTTTTAAA
AGTTAATGACACATAAGATAGTATATTAAAGAGATCA
Protein sequenceShow/hide protein sequence
MASIRVRRRRIILPAVAVAVVVLVFMVSFGRSGSVGHMPSTEEEGRDYQEMKRKMAAKEETEKDRSSETWTEWAKKKISGGLGLRNELREDGVNKIENVVSEAGQYGAEK
GREAEDMAAEKAAETAEEMKAKGKAAEETTEKGFVAGKKKSERIKDDVVGSEDEL