; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G015880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationCmo_Chr06:11137553..11141887
RNA-Seq ExpressionCmoCh06G015880
SyntenyCmoCh06G015880
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029042.1 Chromatin structure-remodeling complex protein BSH [Cucurbita argyrosperma subsp. argyrosperma]7.8e-12693.02Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVG------------------PAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFE
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVG                  PAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFE
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVG------------------PAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFE

Query:  HVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        HVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  HVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

XP_022935705.1 chromatin structure-remodeling complex protein BSH [Cucurbita moschata]3.4e-129100Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

XP_022972053.1 chromatin structure-remodeling complex protein BSH [Cucurbita maxima]2.9e-12899.17Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIA+QNV SARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]9.8e-12999.58Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIA+QNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]4.0e-12293.33Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVV+FAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMY+GEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLI+DQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein5.6e-12293.33Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X11.3e-12192.92Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNT+I+DQFLWDLNNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X11.3e-12192.92Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNT+I+DQFLWDLNNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH1.6e-129100Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

A0A6J1I8S2 chromatin structure-remodeling complex protein BSH1.4e-12899.17Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIA+QNV SARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

SwissProt top hitse value%identityAlignment
O42467 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.1e-1839.57Show/hide
Query:  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW
        +E LVPIRLD+EI+GQ+ +DAFTWN  +      +FA+    DL L P AF+  I  +I+ Q+  + +    +  T +++I IKL++ V N  + DQF W
Subjt:  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW

Query:  DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL
        D++  E+ PE+F+   C +LG +  E    IA +IR QL
Subjt:  DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL

P93045 Chromatin structure-remodeling complex protein BSH5.5e-10678.75Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVN+TLI+DQFLWDLNN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+VASARESRLSKKGRRG +H SASK  G S+DLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
          +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A3.9e-1940.58Show/hide
Query:  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD
        E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I IKL++ V N  + DQF WD
Subjt:  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD

Query:  LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL
        ++  E+ PE+F+   C +LG+   E    IA +IR QL
Subjt:  LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 13.0e-1940.29Show/hide
Query:  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW
        +E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF W
Subjt:  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW

Query:  DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL
        D++  E+ PE+F+   C +LG+   E    IA +IR QL
Subjt:  DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 13.9e-1940.58Show/hide
Query:  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD
        E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF WD
Subjt:  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD

Query:  LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL
        ++  E+ PE+F+   C +LG+   E    IA +IR QL
Subjt:  LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQL

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)3.9e-10778.75Show/hide
Query:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII 
Subjt:  MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIT

Query:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF
        IKLDLRVN+TLI+DQFLWDLNN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+VASARESRLSKKGRRG +H SASK  G S+DLMKLF
Subjt:  IKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLF

Query:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
          +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)5.6e-10678.51Show/hide
Query:  MKSSASANSKSPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKI
Subjt:  MKSSASANSKSPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI

Query:  ITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMK
        I IKLDLRVN+TLI+DQFLWDLNN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+VASARESRLSKKGRRG +H SASK  G S+DLMK
Subjt:  ITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMK

Query:  LFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
        LF  +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  LFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATCGAAATCGATGGTCAGAGATT
CAAAGATGCCTTCACTTGGAACCCTACTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTCAGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTACAATCAAGCTTGATCTTCGAGTAAACAATACG
CTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACC
TGCAATTGCTGTTGCGATTCGAGAGCAGCTTTATGAGATAGCCATGCAGAACGTTGCTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATG
TTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACTGGGACATCTACGAACCAATTGTC
GATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAGGCTAAGGGGCCAAGACGAGGGAAGCGCACTGCAGTCGTTCCGAAAGCTACATAACCAAAACGCTCGAAACATA
CACAACGGGAGAGTCGATCAACCATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGAT
ATCGAAATCGATGGTCAGAGATTCAAAGATGCCTTCACTTGGAACCCTACTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCC
CCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTCAGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTACAATCAAGC
TTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTCTGCAAAGATTTGGGT
ATTGAAGACCCTGAAGTAGGACCTGCAATTGCTGTTGCGATTCGAGAGCAGCTTTATGAGATAGCCATGCAGAACGTTGCTTCAGCAAGAGAAAGCAGACTGAGCAAGAA
GGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACT
GGGACATCTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAATATATTATCGGTTGCAAGGAGTTG
AGAATATCACTCGTATTGTCATCGAACAGTGTCGACTTTTCCAGTGGAGGTAAATTATTCAACTCAGATGAAGTTCGTAGGCAGTTGTTCTTGCTATCTTAACACATACT
TAGCATTCTTTAACTTCCAAGTTAAAAGCTTTCGAAGCAATTCTTCATCGACTGTACGTAATCCCTTTCTAGCTCTCAAGTAGGGACATGAACTCTCTGATAAGTTCATA
TGGTAGATCTTTTGACAAGTTTTACCGTATTGGCATGGACTATATCTCACTAGAGAAGGGTAGACCTTCTGAAATGAGTTTTCATTCTATTTCTTGCCTGTGATTTCATA
GTCAAAATCAGAACCATTCAAGAAGTGTTGAATGACTCATTAAGAAGGATTACACTGTTCCATTTAGCTGATAAGTGAAAAGTTCACTGATAGAACCATCTGGGCTTTTC
CACAATGCTCCATTTTCCTCTTTGGAAGTTGGGATATGGGTCGTGGCAAGGCTTGGTGATAACATTCCATAGCAGGGTCCAAGAGAAACTCTCTTACTTTTGGATATGGC
TGAAAATTTTATTATGAGACTCTCTAGGATGGATTCGGTTTCACCTCCACTTCATGTGTTGCAAACTAGTTCGATAGAGGACTATTTAGAGATTTAGTTCGATAGAGGAC
TATTTAGAGATTTGGAGGTCAATGTGAGCCCGGTTGAAGTTGAGTATGAGGTTGTCGTTAAGGTCAATTGAGTTTGGCAAACTCTTTTAAGAGTTTATTTGTTTCGAAGT
TTATAAGTTTAATCGTTGGAAGTCCAAA
Protein sequenceShow/hide protein sequence
MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNT
LIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIV
DLLSNEEVDALEAKEERAAR