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CmoCh06G015900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:11150041..11150292
RNA-Seq ExpressionCmoCh06G015900
SyntenyCmoCh06G015900
Gene Ontology termsGO:0006897 - endocytosis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582136.1 hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2979.55Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGRSKS+KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEPGIDRKAS FIARFY++RVSD ERQT AV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

KAG6597601.1 hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3798.68Show/hide
Query:  MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTL+V
Subjt:  MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

KAG7029045.1 hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-4198.8Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTL+V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

XP_022138231.1 uncharacterized protein LOC111009454 [Momordica charantia]1.6e-3082.76Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPGIDRKASAFIARFY+ARVSDP+RQT AV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

XP_022935735.1 uncharacterized protein LOC111442555 [Cucurbita moschata]1.6e-41100Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

TrEMBL top hitse value%identityAlignment
A0A6J1C955 uncharacterized protein LOC1110094547.9e-3182.76Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPGIDRKASAFIARFY+ARVSDP+RQT AV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

A0A6J1FBH6 uncharacterized protein LOC1114425557.6e-42100Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

A0A6P6FMC7 uncharacterized protein LOC1124889712.0e-1863.41Show/hide
Query:  GRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV
        G+ KS   FS C+IFK+ CFS G  ++ Y +E   IRRR++ SDED   W AEPGIDRKASAFIARFY++RVSD ERQTLAV
Subjt:  GRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLAV

A0A7J6DWM0 Uncharacterized protein5.3e-1965.43Show/hide
Query:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTL
        G  S S   FS+CS+F S CFS G RD+ Y +E   IRRR+ PS+ED   W+AEPGIDRKASAFIARFY++RVSDPERQTL
Subjt:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTL

A0A803Q4L5 Uncharacterized protein5.3e-1965.43Show/hide
Query:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTL
        G  S S   FS+CS+F S CFS G RD+ Y +E   IRRR+ PS+ED   W+AEPGIDRKASAFIARFY++RVSDPERQTL
Subjt:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein6.0e-0737.04Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESG--EIRRRMWPSDED-TRW-VAEPGIDRKASAFIARFYDARVSDPE
        MGG  +  K  S  S+ KS  F++  +++  W+E     +R R+  +D+D   W +AEP IDR+A+AFIA+F++  + D E
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESG--EIRRRMWPSDED-TRW-VAEPGIDRKASAFIARFYDARVSDPE

AT3G05858.1 unknown protein6.0e-1557.65Show/hide
Query:  MGG--RSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTLA
        MGG  RS S K FS+ S FK+    +   D G WD+ G  R+ M  SDED R WVAEPGIDRKASAFIA+F+  RVS+ ERQTL+
Subjt:  MGG--RSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTLA

AT5G26620.1 unknown protein1.4e-1174.42Show/hide
Query:  RRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTL
        R+ W SDED R WVAEPGIDRKASAFIA+F+ +RVS+ ERQTL
Subjt:  RRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGA
GATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTT
CTGATCCCGAACGACAAACGCTTGCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGA
GATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTT
CTGATCCCGAACGACAAACGCTTGCTGTTTAG
Protein sequenceShow/hide protein sequence
MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLAV