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CmoCh06G015950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G015950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 32
Genome locationCmo_Chr06:11175436..11175696
RNA-Seq ExpressionCmoCh06G015950
SyntenyCmoCh06G015950
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650417.1 hypothetical protein Csa_010756 [Cucumis sativus]1.5e-2368.24Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+ E   E+E+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

KAG6597606.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3894.19Show/hide
Query:  MSMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        MSMSSCNVSM EHG E+ELLVQSEMGRRFLEEQKKYISI ALKKDMIAFEGSSGGQP+PKSENCAPPPLNPYNRGCSKISRCRSDD
Subjt:  MSMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

KAG7029050.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3996.51Show/hide
Query:  MSMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        MSMSSCNVSM EHG E+ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
Subjt:  MSMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]1.5e-2368.24Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+ E   E+E+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

XP_022956250.1 protein RALF-like 32 [Cucurbita moschata]1.5e-2369.41Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+ E G EDE L++SE+ RRFL +QKKYISI ALKKD  A +G  GGQPY KS +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein3.7e-2367.06Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+     E+E+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A5A7VKE5 Protein RALF-like 322.8e-2367.06Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+ E G EDE+L++SE+ RRFL +QKKYISI ALKKD  A +G+SGG+PY KS +CAPPP NPY+RGC KI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A6J1C8Z5 protein RALF-like 327.9e-1857.83Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        SM+ CN S+ E   E+E+L++SE+ RRFLE+QKKYIS + LKKD  A +G   G+PY KSE+C PPP NPY+RGC  I RC+S
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

A0A6J1C9Y4 protein RALF-like 329.0e-2266.27Show/hide
Query:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S CN S+ E   E E+L++SE+ RRFLE+QKKYISI ALKKD  A +GS  GQPY KS +C PPP NPY+RGCSKI RCRSDD
Subjt:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A6J1GXB3 protein RALF-like 327.4e-2469.41Show/hide
Query:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+ E G EDE L++SE+ RRFL +QKKYISI ALKKD  A +G  GGQPY KS +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 325.5e-0839.33Show/hide
Query:  SMSSCNVSMTE-----HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        S S CN S+ E        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+ Y  S  C PPP NPY+RGCSK  RC  D
Subjt:  SMSSCNVSMTE-----HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q2HIM9 Protein RALF-like 311.1e-0538.57Show/hide
Query:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        EDE L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RGC  I+RC  D
Subjt:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q945T0 Rapid alkalinization factor7.4e-0547.14Show/hide
Query:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAP-PPLNPYNRGCSKISRCRS
        E+E  + SE  RR L   KKYIS  AL+K+ +    S  G  Y    NC P    NPY+RGCS I+RCRS
Subjt:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAP-PPLNPYNRGCSKISRCRS

Q9LK37 Protein RALF-like 243.3e-0538.57Show/hide
Query:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        E E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N YNRGCS I+RC  D
Subjt:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q9SRY3 Protein RALF-like 11.5e-0541.98Show/hide
Query:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        S C+ S+ E    +E  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N A    NPY+RGCSKI+RCRS
Subjt:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.1e-0641.98Show/hide
Query:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        S C+ S+ E    +E  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N A    NPY+RGCSKI+RCRS
Subjt:  SSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

AT3G05490.1 ralf-like 222.6e-0539.51Show/hide
Query:  SSCNVSMTE-HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCR
        S C  S+ E    E+E+   S++ RR L  QKKYIS  A++++ +    S  G  Y   +  A    NPY+RGCS I+RCR
Subjt:  SSCNVSMTE-HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCR

AT3G23805.1 ralf-like 242.4e-0638.57Show/hide
Query:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        E E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N YNRGCS I+RC  D
Subjt:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

AT4G13950.1 ralf-like 318.1e-0738.57Show/hide
Query:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        EDE L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RGC  I+RC  D
Subjt:  EDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

AT4G14010.1 ralf-like 323.9e-0939.33Show/hide
Query:  SMSSCNVSMTE-----HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        S S CN S+ E        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+ Y  S  C PPP NPY+RGCSK  RC  D
Subjt:  SMSSCNVSMTE-----HGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGAGTTCTTGCAATGTCTCAATGACCGAGCATGGTTATGAAGATGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAAAAGAAATATAT
CTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGCCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTATAACC
GAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATGAGTTCTTGCAATGTCTCAATGACCGAGCATGGTTATGAAGATGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAAAAGAAATATAT
CTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGCCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTATAACC
GAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA
Protein sequenceShow/hide protein sequence
MSMSSCNVSMTEHGYEDELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD