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CmoCh06G016200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein CMSS1
Genome locationCmo_Chr06:11314443..11316294
RNA-Seq ExpressionCmoCh06G016200
SyntenyCmoCh06G016200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044636.1 protein CMSS1 [Cucumis melo var. makuwa]6.4e-0653.45Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR PDV H+R   NA++G++    E  P+E  SFFL E Q ANDV +SSLELES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
KAG6582088.1 Protein CMSS1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0551.72Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR  D T + D  NA++G++++ LEA P+E  SFFL E Q ANDV +SSLEL+S+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
XP_038906095.1 protein CMSS1 isoform X1 [Benincasa hispida]6.4e-0655.17Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        S KR   V ++RD  NA++G++N+  EA P+E  SFFL E Q ANDV ISSLE ES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
XP_038906103.1 protein CMSS1 isoform X2 [Benincasa hispida]6.4e-0655.17Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        S KR   V ++RD  NA++G++N+  EA P+E  SFFL E Q ANDV ISSLE ES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
XP_038906109.1 protein CMS1 isoform X3 [Benincasa hispida]6.4e-0655.17Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        S KR   V ++RD  NA++G++N+  EA P+E  SFFL E Q ANDV ISSLE ES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
TrEMBL top hitse value%identityAlignment
A0A1S3BYM0 protein CMSS11.5e-0551.72Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR PDV H+R   NA++ ++    E  P+E  SFFL E Q ANDV +SSLELES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
A0A5A7TR86 Protein CMSS13.1e-0653.45Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR PDV H+R   NA++G++    E  P+E  SFFL E Q ANDV +SSLELES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
A0A5D3CZG6 Protein CMSS11.5e-0551.72Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR PDV H+R   NA++ ++    E  P+E  SFFL E Q ANDV +SSLELES+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
A0A6J1GWA7 protein CMS19.1e-0651.72Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR  D T + D  NA++G++++ LEA P+E  SFFL E Q ANDV +SSLEL+S+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
A0A6J1IXV6 protein CMS17.7e-0550Show/hide
Query:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
        + KR  D T + D  N  +G++++ LEA P+E  SFFL E Q ANDV +SSLEL+S+K
Subjt:  SSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAAGAAGCCCCCAGCTCAAAGAGAAACCCCGATGTCACCCACAGTCGCGATACTCATAATGCTAGCGATGGTACTGACAACAACGTTCTGGAGGCATTTCCGGT
GGAGCTATTGAGCTTTTTTCTCCTTGAGTGTCAGGCTGCTAACGATGTGTGGATTTCTTCGCTCGAGTTAGAATCCGTGAAAGCTTTAGGGATATATATTACCTGCAAAC
AACCAGAGATTGGGTTTCTTGATCCTACAGCTGCTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAAGAAGCCCCCAGCTCAAAGAGAAACCCCGATGTCACCCACAGTCGCGATACTCATAATGCTAGCGATGGTACTGACAACAACGTTCTGGAGGCATTTCCGGT
GGAGCTATTGAGCTTTTTTCTCCTTGAGTGTCAGGCTGCTAACGATGTGTGGATTTCTTCGCTCGAGTTAGAATCCGTGAAAGCTTTAGGGATATATATTACCTGCAAAC
AACCAGAGATTGGGTTTCTTGATCCTACAGCTGCTATATGA
Protein sequenceShow/hide protein sequence
MGEEAPSSKRNPDVTHSRDTHNASDGTDNNVLEAFPVELLSFFLLECQAANDVWISSLELESVKALGIYITCKQPEIGFLDPTAAI