CuGenDBv2

Gene ID	CmoCh06G016230
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	mitochondrial import receptor subunit TOM40-1-like
Genome location	Cmo_Chr06:11333145..11334389
RNA-Seq Expression	CmoCh06G016230
Synteny	CmoCh06G016230
Gene Ontology terms	GO:0006032 - chitin catabolic process (biological process) GO:0006952 - defense response (biological process) GO:0016998 - cell wall macromolecule catabolic process (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0005742 - mitochondrial outer membrane translocase complex (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004568 - chitinase activity (molecular function) GO:0008061 - chitin binding (molecular function) GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domains	IPR037930 - Tom40

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597630.1 Mitochondrial import receptor subunit TOM40-1, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-10

94.59

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

XP_007160463.1 hypothetical protein PHAVU_002G324200g [Phaseolus vulgaris]

4.0e-10

91.89

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SV+ HLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

XP_022932584.1 mitochondrial import receptor subunit TOM40-1-like [Cucurbita moschata]

6.1e-11

97.3

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

XP_022972232.1 mitochondrial import receptor subunit TOM40-1-like [Cucurbita maxima]

1.4e-10

94.59

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

XP_023540810.1 mitochondrial import receptor subunit TOM40-1-like [Cucurbita pepo subsp. pepo]

1.4e-10

94.59

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TMU8 Chitinase-like protein 1

2.5e-10

91.89

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVS HLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

A0A5D3D2G5 Chitinase-like protein 1

2.5e-10

91.89

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVS HLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

A0A6J1EXE3 mitochondrial import receptor subunit TOM40-1-like

3.0e-11

97.3

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

A0A6J1I497 mitochondrial import receptor subunit TOM40-1-like

6.6e-11

94.59

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SVSSHLSLGGEVFWAGQHRKSGIGYAARYNT+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

V7CQH6 Uncharacterized protein

1.9e-10

91.89

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SV+ HLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

SwissProt top hits

e value

%identity

Alignment

Q9LHE5 Mitochondrial import receptor subunit TOM40-1

5.4e-10

78.38

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SV++HLSLGGE+FWAG  RKSGIGYAARY T+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

Q9SX55 Probable mitochondrial import receptor subunit TOM40-2

4.3e-07

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Query:  SCYTASIGIESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        S Y A+  I+ V+ HLSLGGE FW GQ   SG+GYAARY T+K V
Subjt:  SCYTASIGIESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

Arabidopsis top hits

e value

%identity

Alignment

AT1G50400.1 Eukaryotic porin family protein

3.0e-08

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Query:  SCYTASIGIESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        S Y A+  I+ V+ HLSLGGE FW GQ   SG+GYAARY T+K V
Subjt:  SCYTASIGIESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

AT3G20000.1 translocase of the outer mitochondrial membrane 40

3.8e-11

78.38

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Query:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV
        I+SV++HLSLGGE+FWAG  RKSGIGYAARY T+KMV
Subjt:  IESVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMV

Sequences

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CDS sequence

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ATGAGGCAGAGACTTCAGAACCCAGTTTCAATTAGGCAATGGTGCCTTATTTGGAGCAAGTTACATTCAGGTACAATTCTGAATGGTTCTAATTATGATGTTGGCTTGTC
CTTTTATAGTTGCTCAAGCATTCTTGATAGCCTTGTACAATTTCTCTTTTGGACTTACGTTATTCTGCATTTTGAGGTGAATGTACTTGATAAGGACACATTTCCTTCTC
CAGCCGCTGGAATTTGGAATGTGTCCCCAAACCCCAGATGTTCATGTTACACTGCCTCTATAGGAATAGAGAGTGTATCTTCCCATCTTTCATTGGGCGGTGAAGTCTTT
TGGGCTGGTCAGCATAGAAAGTCCGGTATTGGTTATGCTGCAAGATACAACACAGAGAAGATGGTATATGTTGTTTGA

mRNA sequence

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Protein sequence

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MRQRLQNPVSIRQWCLIWSKLHSGTILNGSNYDVGLSFYSCSSILDSLVQFLFWTYVILHFEVNVLDKDTFPSPAAGIWNVSPNPRCSCYTASIGIESVSSHLSLGGEVF
WAGQHRKSGIGYAARYNTEKMVYVV

CmoCh06G016230 (gene) of Cucurbita moschata (Rifu) v1 genome