; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G016550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhapless 8
Genome locationCmo_Chr06:11478325..11482027
RNA-Seq ExpressionCmoCh06G016550
SyntenyCmoCh06G016550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597651.1 hypothetical protein SDJN03_10831, partial [Cucurbita argyrosperma subsp. sororia]2.4e-11498.06Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYL+LCQKHGV+NVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREIC+SSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMN ENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYP
        YEEEYP
Subjt:  YEEEYP

KAG7029091.1 hypothetical protein SDJN02_10275 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-13497.94Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYL+LCQKHGV+NVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREIC+SSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMN ENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHSIFSSNGSKSLQLTGARLGKTSMQ
        YEEEYP FANYVRTDLREHSIFSSNGSKSLQLTGARLGKTSMQ
Subjt:  YEEEYPNFANYVRTDLREHSIFSSNGSKSLQLTGARLGKTSMQ

XP_022932720.1 uncharacterized protein LOC111439185 [Cucurbita moschata]6.8e-11795Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHS
        YEEEYPN     R  L+  +
Subjt:  YEEEYPNFANYVRTDLREHS

XP_022972113.1 uncharacterized protein LOC111470745 [Cucurbita maxima]1.7e-11594.09Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVI SAATESNNSREICYSSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVY+MNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHS
        YEEEYPN     R  L+  +
Subjt:  YEEEYPNFANYVRTDLREHS

XP_023539065.1 uncharacterized protein LOC111799818 [Cucurbita pepo subsp. pepo]6.0e-11392.27Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVT+VLPPIHPPRSVIQSSEDDHSIDFK DNK+PIVI SAATESNNSREICYSSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAV+KGLRGVKQSAIVDHGCNSELAEDCSN KLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHS
        YEEEYPN     R  L+  +
Subjt:  YEEEYPNFANYVRTDLREHS

TrEMBL top hitse value%identityAlignment
A0A5E4G8G4 PREDICTED: LOC18774051 isoform X11.4e-2232.79Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQS----------SEDDHSIDFKADNKDPIVI-------------------------
        QY L+CRQK++F  WPFP+KYL +C  +G+++VLPP+    S IQS           +DD ++D+  D K+P  I                         
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQS----------SEDDHSIDFKADNKDPIVI-------------------------

Query:  -HSAATESNNSREICYSSGISHD-----VSFDMLGPQTNTTSHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSEN
         H + ++S++  E   +    HD     VS D     + T   S L+V  Q   ++  S   R+  ++ KGK KKR M  IL+VAKPC+ ED+  +    
Subjt:  -HSAATESNNSREICYSSGISHD-----VSFDMLGPQTNTTSHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSEN

Query:  VDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHGYEE
           +  +E+G  G++    V H CNS+L +D S+EKLE    EE
Subjt:  VDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHGYEE

A0A6J1CW12 uncharacterized protein LOC1110147381.1e-5659.17Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-FKADNKD-PIVIH---------SAATESNNSREICYSSGI-SHDV
        QYTLSCRQKN+F CWPFP KYLLLC  HGV N+LPP+  P  VIQSSE   SID  + DNKD PIV++         SA   S NSR++C+SSGI S DV
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-FKADNKD-PIVIH---------SAATESNNSREICYSSGI-SHDV

Query:  SFDMLGPQ-----TNTTSHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGC
        S +ML P+     T TT HSCLDV+K PI S+DCSRMSRKNDR RKGKQKKR MVDILAVAKPCSLED+Y+MN E                    +++GC
Subjt:  SFDMLGPQ-----TNTTSHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGC

Query:  NSELAEDCSNEKLEIHGY
        NSELAE+CSN+KL+I+ +
Subjt:  NSELAEDCSNEKLEIHGY

A0A6J1F2X5 uncharacterized protein LOC1114391853.3e-11795Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHS
        YEEEYPN     R  L+  +
Subjt:  YEEEYPNFANYVRTDLREHS

A0A6J1I8Y1 uncharacterized protein LOC1114707458.1e-11694.09Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT
        QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVI SAATESNNSREICYSSGISHDVSFDMLGPQTNTT
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTT

Query:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
        SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVY+MNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG
Subjt:  SHSCLDVEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHG

Query:  YEEEYPNFANYVRTDLREHS
        YEEEYPN     R  L+  +
Subjt:  YEEEYPNFANYVRTDLREHS

A0A6J5TI03 Uncharacterized protein1.4e-2230.99Show/hide
Query:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQS----------SEDDHSIDFKADN---------KDPIVIHSAATESNNSREI--C
        QY L+CRQK++F  WPFP+KYL +C  +G+++VLPP+    S IQS           +DD ++D+  D          +D   ++S + E+ ++  I  C
Subjt:  QYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQS----------SEDDHSIDFKADN---------KDPIVIHSAATESNNSREI--C

Query:  Y----SSGISHDVSFDMLGPQTNTTSHSCLDVEKQPIWSVDCSRMS--------------RKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVD
        +    +S   H+ +     PQ  +      D    P  ++  S ++              R+  ++ KGK KKR M  IL+VAKPC+ ED+  +      
Subjt:  Y----SSGISHDVSFDMLGPQTNTTSHSCLDVEKQPIWSVDCSRMS--------------RKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVD

Query:  KNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHGYEE
         +  +E+G  G++    V H CNS+L +D S+EKLE    EE
Subjt:  KNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHGYEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56250.1 hapless 81.2e-0553.85Show/hide
Query:  YTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPP
        Y  S R KNI   WPF    L LC  HG+T+ LPPI PP
Subjt:  YTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPP

AT5G56250.2 hapless 81.2e-0553.85Show/hide
Query:  YTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPP
        Y  S R KNI   WPF    L LC  HG+T+ LPPI PP
Subjt:  YTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAGAACAATATACCCTTTCTTGTCGTCAAAAGAACATATTTGATTGCTGGCCATTTCCAGACAAGTACCTGCTTCTGTGTCAGAAGCATGGTGTTACCAATGT
TTTGCCACCAATTCATCCCCCTCGTAGTGTCATTCAATCATCTGAAGATGACCACTCGATTGATTTTAAGGCAGACAACAAAGATCCCATTGTCATTCATTCAGCTGCTA
CAGAATCAAACAATTCCAGAGAAATCTGTTATTCATCAGGGATATCCCATGATGTTTCTTTTGATATGTTGGGTCCTCAAACGAATACAACTTCACATTCATGTCTCGAT
GTTGAGAAACAGCCAATTTGGTCGGTGGATTGCTCGAGAATGTCGAGGAAAAATGACAGGAGACGAAAAGGGAAACAAAAGAAACGGTTGATGGTGGATATTTTGGCAGT
GGCAAAGCCTTGTAGTTTGGAAGATGTTTATGAAATGAATAGCGAGAATGTTGATAAAAATACAGCCGTTGAGAAAGGGTTGAGAGGAGTTAAACAATCAGCCATTGTTG
ACCATGGCTGCAACTCTGAGCTTGCAGAGGATTGCTCAAATGAAAAGCTTGAAATTCATGGTTATGAAGAAGAATACCCCAACTTTGCAAATTATGTTAGAACAGATTTG
AGGGAGCACAGTATATTTTCCAGCAACGGCAGCAAGAGCCTTCAATTAACAGGGGCGAGACTGGGGAAGACCTCTATGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAGAACAATATACCCTTTCTTGTCGTCAAAAGAACATATTTGATTGCTGGCCATTTCCAGACAAGTACCTGCTTCTGTGTCAGAAGCATGGTGTTACCAATGT
TTTGCCACCAATTCATCCCCCTCGTAGTGTCATTCAATCATCTGAAGATGACCACTCGATTGATTTTAAGGCAGACAACAAAGATCCCATTGTCATTCATTCAGCTGCTA
CAGAATCAAACAATTCCAGAGAAATCTGTTATTCATCAGGGATATCCCATGATGTTTCTTTTGATATGTTGGGTCCTCAAACGAATACAACTTCACATTCATGTCTCGAT
GTTGAGAAACAGCCAATTTGGTCGGTGGATTGCTCGAGAATGTCGAGGAAAAATGACAGGAGACGAAAAGGGAAACAAAAGAAACGGTTGATGGTGGATATTTTGGCAGT
GGCAAAGCCTTGTAGTTTGGAAGATGTTTATGAAATGAATAGCGAGAATGTTGATAAAAATACAGCCGTTGAGAAAGGGTTGAGAGGAGTTAAACAATCAGCCATTGTTG
ACCATGGCTGCAACTCTGAGCTTGCAGAGGATTGCTCAAATGAAAAGCTTGAAATTCATGGTTATGAAGAAGAATACCCCAACTTTGCAAATTATGTTAGAACAGATTTG
AGGGAGCACAGTATATTTTCCAGCAACGGCAGCAAGAGCCTTCAATTAACAGGGGCGAGACTGGGGAAGACCTCTATGCAATGAGCAATATTTCTGTTGGTATTTATTTG
TGTAATGCAAACGAGGAGGTAACAAACTTAAATGCTAATTATTTTGAGCATTCAGGAAATTTTCAACACACCAAAAATGTTAGACCAGAAAGATTGTTCAGAATATGTTG
CATATTTATATGTATGAGCTGCTAGTTGGACAAGGGTTTACCTTAGTTTTCATAAAGGCTGGTTTCTTATGGTCCAAGTTTTGTTATTATTTGATGT
Protein sequenceShow/hide protein sequence
MATEQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSIDFKADNKDPIVIHSAATESNNSREICYSSGISHDVSFDMLGPQTNTTSHSCLD
VEKQPIWSVDCSRMSRKNDRRRKGKQKKRLMVDILAVAKPCSLEDVYEMNSENVDKNTAVEKGLRGVKQSAIVDHGCNSELAEDCSNEKLEIHGYEEEYPNFANYVRTDL
REHSIFSSNGSKSLQLTGARLGKTSMQ