; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G016740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description54S ribosomal protein L51, mitochondrial
Genome locationCmo_Chr06:11580731..11582923
RNA-Seq ExpressionCmoCh06G016740
SyntenyCmoCh06G016740
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR036249 - Thioredoxin-like superfamily
IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597670.1 hypothetical protein SDJN03_10850, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6099.14Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTD
        RHVTKNPSVQGTWKTD
Subjt:  RHVTKNPSVQGTWKTD

KAG7029113.1 mrpl51 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-6299.16Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022932626.1 54S ribosomal protein L51, mitochondrial [Cucurbita moschata]1.4e-62100Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022972093.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]3.9e-6299.16Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_023538941.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita pepo subsp. pepo]2.0e-6198.32Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDW GSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

TrEMBL top hitse value%identityAlignment
A0A061EJZ0 Mitochondrial ribosomal protein L51/S25/CI-B8 family protein1.4e-5283.19Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+SQLP FK+KNPQL+VV ELIRGQHPHLK FYKN N+RV+CV+N+  E+I LHA+RLRNALGRKV+KLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTK+PSVQGTW TDV+F
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial9.2e-5790.76Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLKAFYKNNN+RVVCV+NLD EEI+LHA RLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1EWV2 54S ribosomal protein L51, mitochondrial6.6e-63100Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1I8W1 54S ribosomal protein L51, mitochondrial-like1.9e-6299.16Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like3.3e-5483.19Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFMDS+LP F++KNPQL++V ELIRGQHPHLK FYK+NN RV+CV+N+D E+IHLHATRLRNALGRKV+KL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPS QGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

SwissProt top hitse value%identityAlignment
Q06090 54S ribosomal protein L51, mitochondrial6.2e-1032.46Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNP--QLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRH
        V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q +V+R   +  HP L+A Y N  ++V+CVRNL+ + +      L+++ G  +++ +T++
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNP--QLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRH

Query:  ---VTKNPSVQGTW
            + N SV+G W
Subjt:  ---VTKNPSVQGTW

Q758S3 54S ribosomal protein L51, mitochondrial6.6e-1234.48Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVT
        ++  +K+ + YC+WGGSS+G+R F+ S +L  + +K PQ++    + +  HP LKA Y N   + +CVRNL+ + + L    LR + G ++     RH  
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVT

Query:  K-------NPSVQGTW
        K       N SV+G W
Subjt:  K-------NPSVQGTW

Q8N983 39S ribosomal protein L43, mitochondrial3.4e-0833.64Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV
        R V QLQ+L  S    G SSRG R F++ ++ DF ++NP + +         P + A Y N   R   +     EEI     +L +  G  VI+++    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q99N89 39S ribosomal protein L43, mitochondrial2.0e-0834.55Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV
        R V QLQ+L +S      SSRG R F++ ++ DF ++NP + V         P + A Y N   R   V +   EEI     +L +  G  VI+++    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q9UUC8 54S ribosomal protein L51, mitochondrial7.8e-1331.73Show/hide
Query:  QKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSV
        +++  SYC+WGGSS+G++ F+ ++L    K++  ++      +G+HP ++A+Y    ++V+C R + A  I   A   R++ G K   +K    + NPSV
Subjt:  QKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSV

Query:  QGTW
        +G W
Subjt:  QGTW

Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein1.3e-5073.95Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQL+V+ EL RGQHP+LK  Y+N N+RVVCV+N+D EE+ L+ATRLRN+LGRKV+KL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWKTDVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein5.5e-4660.27Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYK---------------------------NNNQRVVCVR
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQL+V+ EL RGQHP+LK  Y                            N N+RVVCV+
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYK---------------------------NNNQRVVCVR

Query:  NLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF
        N+D EE+ L+ATRLRN+LGRKV+KL+TRHVTK+PSVQGTW T V+F
Subjt:  NLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCGCAATTGCCAGATTT
TAAGAAGAAAAACCCTCAGCTAAAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACAATAATCAACGGGTGGTATGTGTAAGGA
ATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAA
GGTACGTGGAAAACTGATGTAAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
GCAACTCCAGCCAGCAATTTACTTGGAACCAAACCTCAATCGCTCGAGCCTCCCTCCATCATTTGCTCTCCCGCTCTTTGTCGCTCTTTGGGTCTCTTCGTTGGTAGCCG
CACCGATCCTCCGTCTCAGATATAAAGATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGC
ATTTATGGACTCGCAATTGCCAGATTTTAAGAAGAAAAACCCTCAGCTAAAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACA
ATAATCAACGGGTGGTATGTGTAAGGAATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGA
CATGTGACCAAAAATCCTAGTGTGCAAGGTACGTGGAAAACTGATGTAAGATTTTGAGGATGCTTCCTAAAGTGCCTGATTTTCTTTGGAGATTGTCTTTTTCCATCAAG
ATTATGAGATTCCTTAATATGACGTTGTTGAAACAAAACTTCTTTTTAGAGTAGCTTGAGTTTGTAGTTTGTAGTAGTCCAACGTAAACTTTTGAGGCTATTTTGTTCCA
ATTCTCTGAATACTCTCTCTGGAGAAAGTCTTTCCATGAAACATGCAACAATTGCGAACTTATCTTGAATTGATGAAGCAAAACAGGATTCTGAATTTATTTGTGAACAT
ATTTATAGGTTGTTGAGATGTTAATTAAATGAGATCCAAGAGTAAATGATATGAACTTGGTTCATATCAGTAAATGCAGCAGCTAGTCCTTGTATGGTATTCTTGGTTGG
GGTATTGTCCTTTTCTTTGCCATGTTATAATAATGAATGCAAGAGTTGTTTCATTTTA
Protein sequenceShow/hide protein sequence
MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQ
GTWKTDVRF