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CmoCh06G016870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFBA_1 domain-containing protein
Genome locationCmo_Chr06:11640487..11641860
RNA-Seq ExpressionCmoCh06G016870
SyntenyCmoCh06G016870
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR040273 - PAMP-induced secreted peptide 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582005.1 Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2085.25Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        MILVV VAFLSNS AVDAAR+VPGDF+S ++LEMYP+AYE AKNTVSCWLGRLSSGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

KAG6597679.1 hypothetical protein SDJN03_10859, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4177.97Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPK-------------------------GKCFAHIRHYHFHFP
        MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPK                         GKCFAHIRHYHFHFP
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPK-------------------------GKCFAHIRHYHFHFP

Query:  LNTIGVLAYSNLPISQRN
        LNTIGVLAYSNLPISQR+
Subjt:  LNTIGVLAYSNLPISQRN

KGN53012.2 hypothetical protein Csa_023800, partial [Cucumis sativus]1.5e-1981.97Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        ++LVVA+  LSNS  VDAAR+VPGDFAS NHLEMYPSAYE AK+TVSCWLGRLSSGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

OVA08795.1 hypothetical protein BVC80_8801g22 [Macleaya cordata]1.3e-1063.93Show/hide
Query:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPS-AYEHAKNTVSCWLGRLSSGPSPKG
        IL++ VA L+ S  V+AAR++  DFASANHL  YPS  YE AK+T++CWLGRL+SGPSPKG
Subjt:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPS-AYEHAKNTVSCWLGRLSSGPSPKG

TXG72746.1 hypothetical protein EZV62_001325 [Acer yangbiense]1.9e-1162.3Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        ++LV++VA LS+   V+A R++P DFAS NHLE Y S YE AK T+ CWLGRL+SGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

TrEMBL top hitse value%identityAlignment
A0A0A0KU27 Uncharacterized protein7.2e-2081.97Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        ++LVVA+  LSNS  VDAAR+VPGDFAS NHLEMYPSAYE AK+TVSCWLGRLSSGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

A0A200QE97 Uncharacterized protein1.8e-1062.3Show/hide
Query:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYP-SAYEHAKNTVSCWLGRLSSGPSPKG
        IL++ VA LS S  V+A R++  DFASANHL  YP + YE AK+T++CWLGRL+SGPSPKG
Subjt:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYP-SAYEHAKNTVSCWLGRLSSGPSPKG

A0A200QEF4 Uncharacterized protein6.1e-1163.93Show/hide
Query:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPS-AYEHAKNTVSCWLGRLSSGPSPKG
        IL++ VA L+ S  V+AAR++  DFASANHL  YPS  YE AK+T++CWLGRL+SGPSPKG
Subjt:  ILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPS-AYEHAKNTVSCWLGRLSSGPSPKG

A0A2P2J3U6 Uncharacterized protein8.0e-1160.66Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        ++ V+++A LS    V+AAR +P DFA A HLE Y S YE AKNT++CWLGRL+SGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

A0A5C7IW37 Uncharacterized protein9.4e-1262.3Show/hide
Query:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG
        ++LV++VA LS+   V+A R++P DFAS NHLE Y S YE AK T+ CWLGRL+SGPSPKG
Subjt:  MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCTCGTTGTCGCTGTGGCGTTTCTGAGCAACAGTCCCGCCGTTGACGCCGCCAGAATAGTGCCCGGAGACTTTGCGAGCGCCAATCACTTGGAGATGTACCCGTC
GGCGTACGAGCATGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGAAAGTGCTTTGCCCACATCCGCCACTACCACTTTCATT
TTCCATTGAACACAATCGGAGTGCTTGCCTACTCTAATCTGCCCATTTCTCAGCGGAACCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGTGGTGTACCGTTTATGTG
CTATTAGTGTCTTTTGATTTTGGTTCTGAAATTCTTGGTCTCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCTCGTTGTCGCTGTGGCGTTTCTGAGCAACAGTCCCGCCGTTGACGCCGCCAGAATAGTGCCCGGAGACTTTGCGAGCGCCAATCACTTGGAGATGTACCCGTC
GGCGTACGAGCATGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGAAAGTGCTTTGCCCACATCCGCCACTACCACTTTCATT
TTCCATTGAACACAATCGGAGTGCTTGCCTACTCTAATCTGCCCATTTCTCAGCGGAACCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGTGGTGTACCGTTTATGTG
CTATTAGTGTCTTTTGATTTTGGTTCTGAAATTCTTGGTCTCCGTTGA
Protein sequenceShow/hide protein sequence
MILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWLGRLSSGPSPKGKCFAHIRHYHFHFPLNTIGVLAYSNLPISQRNRGGRRSGFIALWCTVYV
LLVSFDFGSEILGLR