; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G016880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmembrane-associated 30 kDa protein, chloroplastic-like
Genome locationCmo_Chr06:11643448..11647746
RNA-Seq ExpressionCmoCh06G016880
SyntenyCmoCh06G016880
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
InterPro domainsIPR007157 - PspA/IM30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597680.1 Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.1e-170100Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

KAG7029124.1 Membrane-associated 30 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.4e-16694.86Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD

Query:  ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
        ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

XP_022932749.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita moschata]7.9e-194100Show/hide
Query:  MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN
        MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN
Subjt:  MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN

Query:  RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL
        RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL
Subjt:  RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL

Query:  AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG
        AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG
Subjt:  AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG

Query:  QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
        QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

XP_022972228.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]7.2e-16396.99Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVF GLALASTPS     SSSKPSTLCVAAKPL T FLNGGGHTLQITWMK LHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKS+QQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

XP_023540726.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-16798.8Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVFTGLALAS PSSSSQPSSSKPSTLCVAAKPL TSFLNGGGHTLQITWMKSLHFNRSHGGR GGALGAHMNLFDRFARVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLT DDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

TrEMBL top hitse value%identityAlignment
A0A1S3BX93 membrane-associated 30 kDa protein, chloroplastic3.2e-15693.37Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVFTGLALASTPSSS QPSSSKP+TLCVA+K L TSFLNGGG+TLQIT MKSLH +RSHG RRGGALGA MNLFDR AR+VKSYANAL+SSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKSYADNANALKAQLDQQK+VVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLT DDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSA PVRDAEIESELN LRQ+AREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

A0A6J1EXW6 membrane-associated 30 kDa protein, chloroplastic-like3.8e-194100Show/hide
Query:  MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN
        MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN
Subjt:  MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFN

Query:  RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL
        RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL
Subjt:  RSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDL

Query:  AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG
        AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG
Subjt:  AREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALG

Query:  QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
        QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  QLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

A0A6J1GWI0 membrane-associated 30 kDa protein, chloroplastic8.3e-15793.67Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MA QTHVFTGLALASTPSSS QPSSSKP+TLCVA K L TSFLNGGG+ LQIT MKSLH +RSHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLTADDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSA PVRDAEIESELN LRQKAREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

A0A6J1I9A6 membrane-associated 30 kDa protein, chloroplastic-like3.5e-16396.99Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MAAQTHVF GLALASTPS     SSSKPSTLCVAAKPL T FLNGGGHTLQITWMK LHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKS+QQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

A0A6J1INR4 membrane-associated 30 kDa protein, chloroplastic-like5.4e-15692.77Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MA QTHV+TGLALASTPSSS QPSSSKP+TLC A K L TSFLNGGG+ LQIT MKSLHF++SHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLTADDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL
        PPGRTVSGSA PVRDAEIESELN LRQKARE+
Subjt:  PPGRTVSGSALPVRDAEIESELNLLRQKAREL

SwissProt top hitse value%identityAlignment
O80796 Membrane-associated protein VIPP1, chloroplastic3.8e-10667.57Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    NR     R    GA MNLF+RF+RVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTV+EMN DLTKMRQATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+AMES+A+AL Q+  D+LEGKF +LE SSVDD+LADLK+ELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE
        PPGR TV+ S   P +D+EIE+ELN LR+KA +
Subjt:  PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE

Q03943 Membrane-associated 30 kDa protein, chloroplastic1.1e-11371.01Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        M  +  +F+GL     PS+  QPSSS      +  KPL+T+       T  +  +K      +   R GGA+G  MNLFDRFARVVKSYANAL+S+FEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQ VLEMNDDLTKMRQATAQVLASQKRLENKYK+AQQA+++WYRKAQ ALQKG++DLAREALKRRKS+ADNA++LKAQLDQQK+VV+NLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+ MESQAEALGQLT DDLEGKFA+LE SSVDD+LA+LK+EL+GSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGRTVSGSAL------PVRDAEIESELNLLRQKAREL
        PPGR+ + S        P RDA+IE EL  LR++++EL
Subjt:  PPGRTVSGSAL------PVRDAEIESELNLLRQKAREL

Q55707 Protein sll06173.4e-4644.19Show/hide
Query:  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADN
        M LFDR  RVV++  N L+S  EDPEK+LEQ V++M +DL ++RQA A+ +A +KR E +     Q A  W  +A+ AL  G+++LAREAL R+KS  D 
Subjt:  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADN

Query:  ANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALL
        A A + QL QQ+ + ENL  N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+ ++A G+L    +E +FA L
Subjt:  ANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALL

Query:  EGSS-VDDELADLKRELSGSSKKG---------ELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
        E SS V+DELA LK  ++G +  G           P   +V  +     DA I+ EL+ LR++   L
Subjt:  EGSS-VDDELADLKRELSGSSKKG---------ELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

Q8S0J7 Probable membrane-associated 30 kDa protein, chloroplastic2.1e-10972.01Show/hide
Query:  PSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLT
        P +S + +   P++       L TSFLN G  +L++  ++  + NR          G   NL DRF+RVVKSYANA++SSFEDPEKIL+Q VLEMNDDLT
Subjt:  PSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLT

Query:  KMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKA
        KMRQATAQVLASQKRLENKYK+A+QA+DDWYR+AQ ALQKGD+DLAREALKRRKSYADNA++LKAQLDQQK VVENLVSNTR+LESKI EA+ KKDTLKA
Subjt:  KMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKA

Query:  RAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTV---SGSALPV
        RAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+AMESQAEALGQL  DDLEGKFALLE SSVDD+LA +K+E+SGSS KGELPPGRT    SG+A P 
Subjt:  RAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTV---SGSALPV

Query:  RDAEIESELNLLRQKARE
        RD EIE+ELN LR+KA E
Subjt:  RDAEIESELNLLRQKARE

Q9RUB7 Phage shock protein A homolog4.7e-2434.53Show/hide
Query:  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADN
        M++FDR +R++++  N +IS  EDP KI++Q + +M       R   A  +A   +LE +  +  + A ++ +KA+ AL+ G +DLAREAL+R +++ D 
Subjt:  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADN

Query:  ANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTAD-DLEGKFA-
        A     Q   Q++ V+ L +  R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME + +A+G+L  D D + +   
Subjt:  ANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTAD-DLEGKFA-

Query:  LLEGSSVDDELADLKRELSGSSK
        L     VDD LA LK ++  S++
Subjt:  LLEGSSVDDELADLKRELSGSSK

Arabidopsis top hitse value%identityAlignment
AT1G65260.1 plastid transcriptionally active 42.7e-10767.57Show/hide
Query:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP
        MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    NR     R    GA MNLF+RF+RVVKSYANALISSFEDP
Subjt:  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL
        EKILEQTV+EMN DLTKMRQATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
        ESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+AMES+A+AL Q+  D+LEGKF +LE SSVDD+LADLK+ELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL

Query:  PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE
        PPGR TV+ S   P +D+EIE+ELN LR+KA +
Subjt:  PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTGAGGTGGAACACAAGCGATCCCCTGTTATCTTCAATCTATCTCAACTCAACACAATTTCACCATTCCGATTCTTTTCTGCAACGTTTTTGCTTGGGTGTTCG
ATCATTCATGGCTGCCCAAACCCACGTCTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCG
CGAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCT
CTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGT
GCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATG
ATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGATGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCT
CAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGC
TCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGT
CTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTCTGCTGGAGGGCTCATCAGTTGACGACGAGCTAGCGGACTTGAAGAGAGAGTTA
TCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAA
GGCAAGAGAATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTGAGGTGGAACACAAGCGATCCCCTGTTATCTTCAATCTATCTCAACTCAACACAATTTCACCATTCCGATTCTTTTCTGCAACGTTTTTGCTTGGGTGTTCG
ATCATTCATGGCTGCCCAAACCCACGTCTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCG
CGAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCT
CTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGT
GCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATG
ATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGATGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCT
CAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGC
TCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGT
CTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTCTGCTGGAGGGCTCATCAGTTGACGACGAGCTAGCGGACTTGAAGAGAGAGTTA
TCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAA
GGCAAGAGAATTGTAGAGATGCCAAATCAGTAGAACTATAAATGTCCAAATTTTCATGCTAGTAACTGGCATCATTTCACATTAGAAGTACAGTGTACAGGAAGAAAAAG
GTTCCAAACAGATCAACTTTGTATTGCTAAACGCCTACATGAGAGAGTACTTTTTGGATTGAGGTGCAATGGGTTATATATTGATGAATCTGTGGGGATCAAATGTTGTT
TGTAAGTTAAATTGCACACAACTTTCTGAACATTGATCAAGTAACTTCTATTTGTATTGGGTTCTTAAGTCAACAAATTATTTCAAACCACAATAAAC
Protein sequenceShow/hide protein sequence
MRLRWNTSDPLLSSIYLNSTQFHHSDSFLQRFCLGVRSFMAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGA
LGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKA
QLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKREL
SGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL