; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G016990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G016990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionrho GTPase-activating protein gacH
Genome locationCmo_Chr06:11713553..11714947
RNA-Seq ExpressionCmoCh06G016990
SyntenyCmoCh06G016990
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597689.1 hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]1.7e-9795.98Show/hide
Query:  FGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRP
        FGGLVMS PPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR 
Subjt:  FGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRP

Query:  ITEDHYSEDYYYS--DDDDDEDSDESSTESSNNNNENKKNYAAMEEQ-EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        ITEDHYSEDYYYS  DDDDDEDS+ESSTESSNNNNEN KNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  ITEDHYSEDYYYS--DDDDDEDSDESSTESSNNNNENKKNYAAMEEQ-EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]9.4e-10197.04Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRPITEDHYSEDYYYS--DDDDDEDSDESSTESSNNNNENKKNYAAMEEQ-EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
        DPR ITEDHYSEDYYYS  DDDDDEDSDESSTESSNNNNEN KNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
Subjt:  DPRPITEDHYSEDYYYS--DDDDDEDSDESSTESSNNNNENKKNYAAMEEQ-EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN

Query:  EIP
        EIP
Subjt:  EIP

XP_022932700.1 rho GTPase-activating protein gacH [Cucurbita moschata]1.5e-106100Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED

Query:  PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

XP_023540596.1 histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]2.9e-10297.5Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLP HWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        DPR ITEDHYSEDYYYSDDDDD+DSDESSTESSNNNNEN KNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  DPRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

XP_023540597.1 uncharacterized protein LOC111800911 isoform X2 [Cucurbita pepo subsp. pepo]6.7e-9989.45Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLK-----------------
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLP HWEQCLDLK                 
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLK-----------------

Query:  -TGEIYYINWRNGMKAKEDPRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCP
         TGEIYYINWRNGMKAKEDPR ITEDHYSEDYYYSDDDDD+DSDESSTESSNNNNEN KNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCP
Subjt:  -TGEIYYINWRNGMKAKEDPRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCP

Query:  KCSNGQLLHFDRSENEIP
        KCSNGQLLHFDRSENEIP
Subjt:  KCSNGQLLHFDRSENEIP

TrEMBL top hitse value%identityAlignment
A0A6J1F2V9 rho GTPase-activating protein gacH7.3e-107100Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED

Query:  PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  PRPITEDHYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X21.3e-5566.33Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH
        MS  P MAT+TAALERSL+NCSLS         H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D 
Subjt:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH

Query:  YSEDYY-YSDDDDDE----DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        YS+DYY YSDDDDD+    DS+ESST SSNN N+NK           EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LLHFDRSEN+IP
Subjt:  YSEDYY-YSDDDDDE----DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

A0A6J1GTV5 protein Tube-like isoform X12.4e-5462.8Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH
        MS  P MAT+TAALERSL+NCSLS         H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D 
Subjt:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH

Query:  YSEDYY-YSDDDDDE---------------DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFD
        YS+DYY YSDDDDD+               DS+ESST SSNN N+NK           EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LLHFD
Subjt:  YSEDYY-YSDDDDDE---------------DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFD

Query:  RSENEIP
        RSEN+IP
Subjt:  RSENEIP

A0A6J1I5N3 uncharacterized protein LOC1114708941.9e-9192.82Show/hide
Query:  MSTPPNMATITAALERSLQNCSLS--RRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITED
        MSTPPNMATITAALERSLQNCSLS  RRRRHHDHH QQQ APNSSSS LLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR ITED
Subjt:  MSTPPNMATITAALERSLQNCSLS--RRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITED

Query:  HYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAM---EEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        HYSEDYYY DDDD  DSDESSTESSNNNN+N KNYAAM   EEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  HYSEDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAM---EEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

A0A6J1IQL3 methionine aminopeptidase 2-like3.8e-5565.17Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH
        MS  P MAT+TAALERSLQNCSLS         H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D 
Subjt:  MSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITE-DH

Query:  YSEDYY-YSDDDDDE---------DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEI
        YS+DYY YSDDDDD          DS+ESSTESSNN N+NK           EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LL+FDRSEN+I
Subjt:  YSEDYY-YSDDDDDE---------DSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEI

Query:  P
        P
Subjt:  P

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein9.3e-3045.26Show/hide
Query:  MATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-PITEDHYSEDYY
        MA IT  LERS+QNCSL  RR               S   +      L+L+SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR  ++  +Y++   
Subjt:  MATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-PITEDHYSEDYY

Query:  YSDDDDDEDSDE-----SSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
                 S+E      S ESS+ ++ + + Y        +EE++EDVLVVAGCK+CLMYFMVPKL +DCPKC+  QLLHFD+  +  P
Subjt:  YSDDDDDEDSDE-----SSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)4.1e-4660.43Show/hide
Query:  PNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPI-TEDHYS
        PNM TIT +LE+S+ NCSL+ RRR             SSS++ + P    TL+LNSH+SLP HWEQCLDLKTGEIYYINW+NGM+ KEDPR +   D  S
Subjt:  PNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPI-TEDHYS

Query:  EDYY----YSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDR
         D Y      +D    DS+ESS+ESS ++ EN K     EE+EEEEEEEEDVLVVAGCK+C MYFMVPKLVEDCPKC+  QLLHFDR
Subjt:  EDYY----YSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDR

AT2G33510.2 unknown protein4.3e-4355.94Show/hide
Query:  PNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNGMK
        PNM TIT +LE+S+ NCSL+ RRR             SSS++ + P    TL+LNSH+SLP HWEQCLDLK               TGEIYYINW+NGM+
Subjt:  PNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNGMK

Query:  AKEDPRPI-TEDHYSEDYY----YSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHF
         KEDPR +   D  S D Y      +D    DS+ESS+ESS ++ EN K     EE+EEEEEEEEDVLVVAGCK+C MYFMVPKLVEDCPKC+  QLLHF
Subjt:  AKEDPRPI-TEDHYSEDYY----YSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHF

Query:  DR
        DR
Subjt:  DR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTAAGCTTTGGTGGGTTAGTAATGAGTACACCTCCAAATATGGCAACAATCACAGCCGCCTTAGAACGCTCTCTTCAGAACTGTTCCTTAAGCCGCCGCCGCCG
CCATCATGATCATCATCACCAACAACAACAAGCCCCAAATTCCTCTTCTTCTGATCTTCTTCAACCTCCCACCACTTTGGACCTCAACTCCCATATCTCTCTCCCTTACC
ACTGGGAGCAGTGTCTCGATCTAAAGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGGAGGATCCGAGGCCTATCACAGAAGATCATTATAGT
GAAGATTACTATTACTCGGATGACGATGACGATGAGGATAGCGACGAGTCGTCGACGGAGTCATCGAATAACAACAACGAGAACAAGAAGAACTATGCAGCGATGGAAGA
ACAGGAGGAAGAAGAAGAAGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTATGGTGCCAAAGCTGGTTGAAGATTGTCCAAAATGCA
GTAATGGTCAGCTTCTTCATTTTGATCGCTCTGAAAATGAGATTCCATGA
mRNA sequenceShow/hide mRNA sequence
TCTTTCTTTCCTTCTGGTTCCTTCATTTGTTGTTCATGTTCCTAAGCTTTGGTGGGTTAGTAATGAGTACACCTCCAAATATGGCAACAATCACAGCCGCCTTAGAACGC
TCTCTTCAGAACTGTTCCTTAAGCCGCCGCCGCCGCCATCATGATCATCATCACCAACAACAACAAGCCCCAAATTCCTCTTCTTCTGATCTTCTTCAACCTCCCACCAC
TTTGGACCTCAACTCCCATATCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATCTAAAGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGG
AGGATCCGAGGCCTATCACAGAAGATCATTATAGTGAAGATTACTATTACTCGGATGACGATGACGATGAGGATAGCGACGAGTCGTCGACGGAGTCATCGAATAACAAC
AACGAGAACAAGAAGAACTATGCAGCGATGGAAGAACAGGAGGAAGAAGAAGAAGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTAT
GGTGCCAAAGCTGGTTGAAGATTGTCCAAAATGCAGTAATGGTCAGCTTCTTCATTTTGATCGCTCTGAAAATGAGATTCCATGAATGACACAACTTTCCACTTGCTTTT
CTTTCTGGGTTTTTTTTTGCTTTGATTCATGGGGGAATGAGAGGAAGAAGAAGACAGAGAGAAACCCTTTTCATTTTTGCCTTTCAAATTGTTTCCATGTGTATTTGTAT
TTGTCAGAAAAGGAGGCCAATGGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGCTTTGGCTTTTGTTTTTATAAATTTCTTCATTTTTTGTTCTTCTTTTTCAACTCTA
ATCATGTGAATGGGTGTTCAATTGCAAACAAACCTTAGTTTAATGGAAATAGAATTTCAAGAAAAGAATCAAACCCT
Protein sequenceShow/hide protein sequence
MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRPITEDHYS
EDYYYSDDDDDEDSDESSTESSNNNNENKKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP