; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G000160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G000160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationCmo_Chr07:96088..98700
RNA-Seq ExpressionCmoCh07G000160
SyntenyCmoCh07G000160
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594380.1 Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.4e-8797.01Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTP-GCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFS
        MRFLSVTS FSLSPHCFPL+VQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTP GCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTP-GCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFS

Query:  SDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        SDLERN ADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGW NP
Subjt:  SDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]1.1e-91100Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

XP_023003546.1 cytochrome c6, chloroplastic [Cucurbita maxima]6.4e-8795.18Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        MR LSV SDFSLSPHCF LKVQRRT VC+MRRQVK LK LAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHD GGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]5.6e-9199.4Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQV ILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]2.7e-7783.73Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        M  LS TS+F  +PHCFPLK +RRT VCQ+R QVKIL +LAPPLIAV +AL PLN+TPGC ALAQ+AEIERGGALF+ ACIGCHD GGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein1.5e-6582.43Show/hide
Query:  LKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITY
        L  +RRT VCQ+R QVKILK L PPLIA+L+ L PLNKT GC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATLFSSDLERNGAD+EEEIY+ITY
Subjt:  LKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITY

Query:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
         GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic3.0e-7481.66Show/hide
Query:  MRFLSVTSDF---SLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATL
        M+ LSVTSDF     SPH FPL   RRT VCQ+R  VKIL+TLAPPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ ACIGCHD GGNIIQPGATL
Subjt:  MRFLSVTSDF---SLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATL

Query:  FSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic2.0e-7079.64Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMR-RQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFS
        M  LS  SDFS++ HCF +K +R TAVCQ R +Q+KI K+ APPLIAVLIAL P+ KTPGC  LAQ+ EIERGGALFS +CIGCHD GGNIIQPGATLFS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMR-RQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFS

Query:  SDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        SDLERNGAD EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQE+EIR+LAKFVKIQADRGW NP
Subjt:  SDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic5.5e-92100Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic3.1e-8795.18Show/hide
Query:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS
        MR LSV SDFSLSPHCF LKVQRRT VC+MRRQVK LK LAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHD GGNIIQPGATLFSS
Subjt:  MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSS

Query:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
        DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP
Subjt:  DLERNGADSEEEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c61.5e-0936.73Show/hide
Query:  AEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEI-YQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGW
        A+IE G  +F+  C  CH  G N+I P  TL    LE NG ++   I YQ+T  GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  AEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEI-YQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGW

P07497 Cytochrome c61.3e-1031.78Show/hide
Query:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  + P          AQ+A++  GG +FS  C  CH  G N++ P  TL  +DL++ G  S E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW

P25935 Cytochrome c61.3e-1031.78Show/hide
Query:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR
        +IL T    L+ +L  + P          AQ+A++  GG +FS  C  CH  G N++ P  TL  +DL++ G  S E I      GKG MP FG      
Subjt:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW

P46445 Cytochrome c61.5e-0931.78Show/hide
Query:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR
        +I   +A P +  L  ++ L  T      A +A++  G A+F+  C  CH+ G N I P  TL  +DLE NG +S   I      G G MPGF      +
Subjt:  KILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW
        G      R+ + ++  +A +V  QA++GW
Subjt:  GQCTFGPRLQEEEIRVLAKFVKIQADRGW

Q93VA3 Cytochrome c6, chloroplastic8.6e-5069.77Show/hide
Query:  ILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+ P+   P   +L Q+ +I+RG  LF+ ACIGCHD GGNIIQPGATLF+ DLERNG D+EEEIY++TY+GKGRMPGFGE C PRG
Subjt:  ILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRVLAKFVKIQADRGWP
        QCTFGPRLQ+EEI++LA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRVLAKFVKIQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c6.1e-5169.77Show/hide
Query:  ILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+ P+   P   +L Q+ +I+RG  LF+ ACIGCHD GGNIIQPGATLF+ DLERNG D+EEEIY++TY+GKGRMPGFGE C PRG
Subjt:  ILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSEEEIYQITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRVLAKFVKIQADRGWP
        QCTFGPRLQ+EEI++LA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRVLAKFVKIQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTTTCTCTCCGTAACTTCAGATTTTAGCCTTAGTCCCCATTGCTTTCCACTAAAGGTACAGCGACGAACTGCTGTTTGTCAAATGCGTAGACAAGTTAAGATTCT
CAAGACCTTGGCGCCCCCTCTGATTGCTGTGCTTATAGCGTTATATCCTCTCAACAAAACCCCAGGATGTTATGCGCTTGCTCAATCGGCAGAAATAGAAAGAGGAGGTG
CATTGTTTAGTCACGCTTGCATTGGCTGCCATGATGCTGGGGGAAACATAATTCAACCCGGTGCGACGCTCTTTTCAAGTGATCTTGAAAGAAACGGAGCTGATTCTGAA
GAGGAGATTTACCAAATTACATATTACGGGAAAGGAAGAATGCCTGGTTTCGGTGAAAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGA
GATTAGGGTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
GACCGCCTATTTTCTGTTCCGGTGAAGGCGAGGCGCTACATCCAAAACCCGCCAAAGCGCAGGCCTGCGACGGCGATAGCTCCCGCGTAAGAGACGAAAGAGATGCGTTT
TCTCTCCGTAACTTCAGATTTTAGCCTTAGTCCCCATTGCTTTCCACTAAAGGTACAGCGACGAACTGCTGTTTGTCAAATGCGTAGACAAGTTAAGATTCTCAAGACCT
TGGCGCCCCCTCTGATTGCTGTGCTTATAGCGTTATATCCTCTCAACAAAACCCCAGGATGTTATGCGCTTGCTCAATCGGCAGAAATAGAAAGAGGAGGTGCATTGTTT
AGTCACGCTTGCATTGGCTGCCATGATGCTGGGGGAAACATAATTCAACCCGGTGCGACGCTCTTTTCAAGTGATCTTGAAAGAAACGGAGCTGATTCTGAAGAGGAGAT
TTACCAAATTACATATTACGGGAAAGGAAGAATGCCTGGTTTCGGTGAAAACTGCAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAGATTAGGG
TTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
Protein sequenceShow/hide protein sequence
MRFLSVTSDFSLSPHCFPLKVQRRTAVCQMRRQVKILKTLAPPLIAVLIALYPLNKTPGCYALAQSAEIERGGALFSHACIGCHDAGGNIIQPGATLFSSDLERNGADSE
EEIYQITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRVLAKFVKIQADRGWPNP