CuGenDBv2

Gene ID	CmoCh07G000220
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transmembrane protein
Genome location	Cmo_Chr07:122292..123769
RNA-Seq Expression	CmoCh07G000220
Synteny	CmoCh07G000220
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026389.1 hypothetical protein SDJN02_10389 [Cucurbita argyrosperma subsp. argyrosperma]

7.1e-89

97.67

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRLDCN GRMNTERTAF  LRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REEGKETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

XP_022926368.1 uncharacterized protein LOC111433537 [Cucurbita moschata]

4.0e-92

100

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

XP_023003848.1 uncharacterized protein LOC111497315 [Cucurbita maxima]

3.5e-88

97.09

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRL CNYGRMNTERTAF HLRPIGRR NGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REE KETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

XP_023518065.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo]

6.5e-90

98.26

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRL CNYGRMNTERTAF HLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REEGKETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

XP_038881100.1 uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]

5.5e-81

89.53

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNP L CNYGRM+++  AF HLR IG R+NGYRKLTVF+VTEGSAKSSESEETIPSWAKPDSEEPPPW REEGKE G+Q GFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSI YAPLLGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIJ8 Uncharacterized protein

7.2e-79

87.79

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNP L CNYGRM+ +R A  HLR  GRR+NGYRKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EEGKE G+Q GFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSI YAPLLGFFA TGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1CYX3 uncharacterized protein LOC111015749

4.2e-79

86.05

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSAT+LSYCNP L CNYGRM+T+R     +RPIGRR+NGY K TVF+V EGSAKSSESEETIPSWAKPDSEEPPPW REE KE GSQ GFQ+PFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPT+ FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1EER1 uncharacterized protein LOC111433537

2.0e-92

100

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1IIG9 uncharacterized protein LOC111477793

1.9e-79

88.89

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSY NP L CNYG+M+TER AF  LR IGRR+NG+R LTVF+ TEGSAKSSESEETIPSWAKPDSEEPPPW REEGKE G+Q GFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGY
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGY
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGY

A0A6J1KQE7 uncharacterized protein LOC111497315

1.7e-88

97.09

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Query:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA
        MSATLLSYCNPRL CNYGRMNTERTAF HLRPIGRR NGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REE KETGSQLGFQVPFYVYLLA
Subjt:  MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51510.1 unknown protein

1.3e-48

70.45

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Query:  RKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFA
        R+L V + TEGS KS ESE   PSWA PDS+EPPPW R EG+ + SQ  F+VPF+VYLLAS+ITAIAAIGSVFEY ++ PVFGI+ SDSIFY P+LGFFA
Subjt:  RKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFA

Query:  FTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
         TGIPT+ FLWFKSVE ANKEA++QD+RDG+L
Subjt:  FTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

Sequences

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CDS sequence

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mRNA sequence

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ATGTCTGCGACACTATTGTCTTATTGCAATCCAAGGTTAGATTGTAATTACGGGAGGATGAATACGGAACGCACTGCATTCGTACACTTGCGGCCTATTGGAAGGAGAAG
CAATGGGTATCGCAAGCTTACTGTGTTTTCCGTTACTGAAGGGTCTGCAAAATCGAGCGAGTCTGAAGAAACAATCCCTTCCTGGGCTAAACCTGATTCGGAGGAGCCTC
CTCCTTGGGTAAGGGAGGAAGGCAAAGAAACTGGATCCCAACTGGGATTTCAGGTCCCTTTCTACGTTTACTTACTCGCCTCATCTATCACTGCAATTGCCGCTATAGGC
TCAGTATTTGAGTACGTCAACCAGAAGCCTGTGTTTGGAATCATAAACTCAGACAGCATATTTTACGCTCCATTGCTTGGATTTTTCGCATTTACGGGCATTCCCACTGC
TGGATTCCTTTGGTTCAAATCTGTGGAAGTTGCCAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGTTACTTGTAGAACAATTGTTGTCCTTTGGATGTAACGATGC
TGTTTATATTACTTCTTTGTGAACTGTATATTCCCTGTGAGCATGCTACACGGTGCCACCGATGTTCTCAAAACCAGACTTCCCTGTGATCAACTATACTGCAAATAGAT
ACTTTGCTGCACCAATTCAAAGACTCTTTGACATATTCTCTCATTCTTGAACAGCCTGACATATTCTCTCATTCCAGAGTCCGAGAGACTTGTGAGCAGACTTCTCGAAC
ATACTTGTATCATATGCTTCAT

Protein sequence

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MSATLLSYCNPRLDCNYGRMNTERTAFVHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWVREEGKETGSQLGFQVPFYVYLLASSITAIAAIG
SVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL

CmoCh07G000220 (gene) of Cucurbita moschata (Rifu) v1 genome