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CmoCh07G001100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G001100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProteasome subunit alpha type-5
Genome locationCmo_Chr07:622305..622670
RNA-Seq ExpressionCmoCh07G001100
SyntenyCmoCh07G001100
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052545.1 hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa]3.0e-1745.86Show/hide
Query:  MGFKI----QPSSSPNNLYYRSISLSLILLFLLIS-FSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT------------FTAKKLQME-----------
        MGFKI     P SSPN L +  ISLSLIL FL+ S  SS KPL     N+  HHR    +H  A  TT            + +KKL+ME           
Subjt:  MGFKI----QPSSSPNNLYYRSISLSLILLFLLIS-FSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT------------FTAKKLQME-----------

Query:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                   +N  KK +K +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

KAG6581427.1 hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2052.38Show/hide
Query:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTF-----------TAKKLQMETNKKKKK----------
        MGFKIQ   SP    +  IS+SLIL FLLIS SS+  LL  R ++   HR+RTTLH GAPTT F            A KLQM    K KK          
Subjt:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTF-----------TAKKLQMETNKKKKK----------

Query:  ------NKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHLSA
              NK TAFS MLPKGFVPPSGSSPCHN++P+    AFYCHLSA
Subjt:  ------NKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHLSA

KAG6594469.1 hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]6.8e-5492.56Show/hide
Query:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
        MGFKIQPS SPN LYY SISLSLIL FLLISFSSA+PL LRR NLAAHHR+RTTLHVGAPTTTFTAKKLQMETNKKKKKNK TAFSAMLPKGFVPPSGSS
Subjt:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS

Query:  PCHNENPEFVAFYCHLSATNP
        PCHNENPEFVAFYCHLSATNP
Subjt:  PCHNENPEFVAFYCHLSATNP

KAG7026467.1 hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5493.39Show/hide
Query:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
        MGFKIQPS SPN LYY SISLSLIL FLLIS SSA+PL LRRPNLAAHHR+RTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
Subjt:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS

Query:  PCHNENPEFVAFYCHLSATNP
        PCHNENPEFVAFYCHLSATNP
Subjt:  PCHNENPEFVAFYCHLSATNP

KGN49393.1 hypothetical protein Csa_004373 [Cucumis sativus]1.6e-1544.94Show/hide
Query:  MGFKIQPS-SSPNNLYYRSISLSLILLFLLI-SFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT--------------FTAKKLQME------------
        MGFKI  S SSPN L +  ISLSLIL FLL  + SS KPL    P   ++ R+RTT+  G+  TT              + + KL+ME            
Subjt:  MGFKIQPS-SSPNNLYYRSISLSLILLFLLI-SFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT--------------FTAKKLQME------------

Query:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                    +N K K +K +AFSAMLPKGFVPPSGSSPCHNE+P+   +AFYCHL
Subjt:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

TrEMBL top hitse value%identityAlignment
A0A0A0KIK1 Uncharacterized protein8.0e-1644.94Show/hide
Query:  MGFKIQPS-SSPNNLYYRSISLSLILLFLLI-SFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT--------------FTAKKLQME------------
        MGFKI  S SSPN L +  ISLSLIL FLL  + SS KPL    P   ++ R+RTT+  G+  TT              + + KL+ME            
Subjt:  MGFKIQPS-SSPNNLYYRSISLSLILLFLLI-SFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT--------------FTAKKLQME------------

Query:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                    +N K K +K +AFSAMLPKGFVPPSGSSPCHNE+P+   +AFYCHL
Subjt:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

A0A2N9J2Z4 Uncharacterized protein7.2e-0940.91Show/hide
Query:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSS--AKPLLLRRPNLAAHHRYRTTLHVGAPTTTF--------TAKKLQMETNKKKKKN-KATAFSAML
        MGF     SS    +Y  + LSL+L+      SS   +P      N+ AHH   + +     T TF          K+ +M   +KK KN K   FS ML
Subjt:  MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSS--AKPLLLRRPNLAAHHRYRTTLHVGAPTTTF--------TAKKLQMETNKKKKKN-KATAFSAML

Query:  PKGFVPPSGSSPCHNENPEFVAFYCHLSATNP
        PKG VPPSGSSPCHNE P+ V  YC LS T P
Subjt:  PKGFVPPSGSSPCHNENPEFVAFYCHLSATNP

A0A438JP87 Uncharacterized protein3.6e-0839.68Show/hide
Query:  LYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTT--TFTAK-----KLQMETNKKKKKN-----------KATAFSAMLPKGFVP
        L Y    + L+LLF    FS A        N  + H  + +     PT+   F  K      L  E N KKKK            +   FSAMLPKGFVP
Subjt:  LYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTT--TFTAK-----KLQMETNKKKKKN-----------KATAFSAMLPKGFVP

Query:  PSGSSPCHNENPEFVAFYCHLSATNP
        PSGSSPCHN+ P  +AFYC LS+  P
Subjt:  PSGSSPCHNENPEFVAFYCHLSATNP

A0A5A7UFQ9 Uncharacterized protein1.5e-1745.86Show/hide
Query:  MGFKI----QPSSSPNNLYYRSISLSLILLFLLIS-FSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT------------FTAKKLQME-----------
        MGFKI     P SSPN L +  ISLSLIL FL+ S  SS KPL     N+  HHR    +H  A  TT            + +KKL+ME           
Subjt:  MGFKI----QPSSSPNNLYYRSISLSLILLFLLIS-FSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTT------------FTAKKLQME-----------

Query:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                   +N  KK +K +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

A0A7J6ER19 Uncharacterized protein1.2e-0861.82Show/hide
Query:  KKLQMETNKKKKKNK-----ATAFSAMLPKGFVPPSGSSPCHNENPEFVAFYCHL
        KK  M   +KKK NK     + +FS MLPKGFVPPSGSSPCHNENP  V F+C L
Subjt:  KKLQMETNKKKKKNK-----ATAFSAMLPKGFVPPSGSSPCHNENPEFVAFYCHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18335.1 unknown protein6.1e-0847.83Show/hide
Query:  RYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENP-EFVAFYCHLS
        R+R  LH  A      AKK     N   +  +   FS MLPKGFVPPSGSSPCHN+NP      +C LS
Subjt:  RYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENP-EFVAFYCHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCAAGATTCAACCCTCCTCATCACCAAATAACCTCTACTACCGCTCAATCTCTCTCTCTCTCATCCTCTTATTTCTCCTAATCTCCTTCTCATCCGCTAAACC
CCTTCTCCTCCGCCGCCCCAACCTCGCCGCTCATCACCGGTATCGGACCACCCTCCACGTCGGCGCACCCACCACCACATTCACAGCCAAGAAATTACAAATGGAGACCA
ACAAGAAGAAGAAAAAGAATAAGGCCACGGCTTTTTCTGCGATGCTTCCGAAGGGATTTGTCCCTCCCTCTGGTTCGTCTCCTTGCCATAACGAAAATCCTGAATTTGTT
GCCTTTTATTGCCATCTTTCTGCAACCAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCAAGATTCAACCCTCCTCATCACCAAATAACCTCTACTACCGCTCAATCTCTCTCTCTCTCATCCTCTTATTTCTCCTAATCTCCTTCTCATCCGCTAAACC
CCTTCTCCTCCGCCGCCCCAACCTCGCCGCTCATCACCGGTATCGGACCACCCTCCACGTCGGCGCACCCACCACCACATTCACAGCCAAGAAATTACAAATGGAGACCA
ACAAGAAGAAGAAAAAGAATAAGGCCACGGCTTTTTCTGCGATGCTTCCGAAGGGATTTGTCCCTCCCTCTGGTTCGTCTCCTTGCCATAACGAAAATCCTGAATTTGTT
GCCTTTTATTGCCATCTTTCTGCAACCAATCCTTGA
Protein sequenceShow/hide protein sequence
MGFKIQPSSSPNNLYYRSISLSLILLFLLISFSSAKPLLLRRPNLAAHHRYRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPEFV
AFYCHLSATNP