; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G001400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G001400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L32, putative
Genome locationCmo_Chr07:769259..770256
RNA-Seq ExpressionCmoCh07G001400
SyntenyCmoCh07G001400
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001515 - Ribosomal protein L32e
IPR036351 - Ribosomal protein L32e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134637.1 60S ribosomal protein L32-1 [Cucumis sativus]8.6e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022142034.1 60S ribosomal protein L32-1-like [Momordica charantia]1.1e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPN+GYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022925632.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata]8.6e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022926464.1 60S ribosomal protein L32-1-like [Cucurbita moschata]7.8e-67100Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_038883938.1 60S ribosomal protein L32-1-like [Benincasa hispida]1.9e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV EL+LLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

TrEMBL top hitse value%identityAlignment
A0A0A0KLV4 Uncharacterized protein4.2e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1EC74 60S ribosomal protein L32-1-like isoform X144.2e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1EL67 60S ribosomal protein L32-1-like3.8e-67100Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1INV4 60S ribosomal protein L32-1-like isoform X24.2e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1KPI9 60S ribosomal protein L32-1-like3.8e-67100Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

SwissProt top hitse value%identityAlignment
E2RKA8 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST

Query:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE
        K RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE

P49211 60S ribosomal protein L32-14.3e-6086.47Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTKKRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

P62910 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST

Query:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE
        K RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q76KA3 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST
        PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST

Query:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE
        K RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  KKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q9FHG2 60S ribosomal protein L32-22.8e-5984.21Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +STKKRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

Arabidopsis top hitse value%identityAlignment
AT4G18100.1 Ribosomal protein L32e3.0e-6186.47Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTKKRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.1 Ribosomal protein L32e2.0e-6084.21Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +STKKRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.2 Ribosomal protein L32e2.0e-6084.21Show/hide
Query:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHD

Query:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +STKKRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGAGGGTTAAGCAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGTAGACCGAA
GGGTATTGATTCTCGTGTCCGAAGAAAGTTCAAAGGATGCACTTTGATGCCAAACATCGGTTATGGTACTGACAAGAAGACCCGCCACTATCTTCCTAATGGATTCAAGA
AGTTCGTCGTGCACAATGTGAATGAGCTTGAACTGTTGATGATGCACAACAGGACTTACTGTGCTGAGATTGCACACGATGTGTCCACAAAAAAGAGGAAGGAGATCGTG
GAGAGAGCTGCCCAACTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGAGGGTTAAGCAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGTAGACCGAA
GGGTATTGATTCTCGTGTCCGAAGAAAGTTCAAAGGATGCACTTTGATGCCAAACATCGGTTATGGTACTGACAAGAAGACCCGCCACTATCTTCCTAATGGATTCAAGA
AGTTCGTCGTGCACAATGTGAATGAGCTTGAACTGTTGATGATGCACAACAGGACTTACTGTGCTGAGATTGCACACGATGTGTCCACAAAAAAGAGGAAGGAGATCGTG
GAGAGAGCTGCCCAACTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAATGA
Protein sequenceShow/hide protein sequence
MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIV
ERAAQLDVVVTNKLARLRSQEDE