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CmoCh07G001950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G001950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCarbohydrate binding domain protein
Genome locationCmo_Chr07:1004860..1005606
RNA-Seq ExpressionCmoCh07G001950
SyntenyCmoCh07G001950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER24480.1 RHOMBOID-like protein 3 [Striga asiatica]2.1e-0653.97Show/hide
Query:  MEETPQPLWMPPKLCRREVREVLTQRGTHDLPIIETLNQNRTRKNASLRQRHNMNMLPIENRA
        MEE PQPL MPP  C R+V  VL +RGTH+ P   T  Q  + +NASLRQR +     IENRA
Subjt:  MEETPQPLWMPPKLCRREVREVLTQRGTHDLPIIETLNQNRTRKNASLRQRHNMNMLPIENRA
GER24482.1 carbohydrate binding domain protein [Striga asiatica]8.8e-0562.75Show/hide
Query:  KAQRRARAAHPAKRCVRSKTLWWRWRTRGNAANEERQRRARIAEATAIMAG
        KA RRARAAHPA R VRS TLWW  R  GNAA+ +  RR RIA AT   +G
Subjt:  KAQRRARAAHPAKRCVRSKTLWWRWRTRGNAANEERQRRARIAEATAIMAG
TrEMBL top hitse value%identityAlignment
A0A5A7NUM6 RHOMBOID-like protein 31.0e-0653.97Show/hide
Query:  MEETPQPLWMPPKLCRREVREVLTQRGTHDLPIIETLNQNRTRKNASLRQRHNMNMLPIENRA
        MEE PQPL MPP  C R+V  VL +RGTH+ P   T  Q  + +NASLRQR +     IENRA
Subjt:  MEETPQPLWMPPKLCRREVREVLTQRGTHDLPIIETLNQNRTRKNASLRQRHNMNMLPIENRA
A0A5A7NVG3 Carbohydrate binding domain protein4.3e-0562.75Show/hide
Query:  KAQRRARAAHPAKRCVRSKTLWWRWRTRGNAANEERQRRARIAEATAIMAG
        KA RRARAAHPA R VRS TLWW  R  GNAA+ +  RR RIA AT   +G
Subjt:  KAQRRARAAHPAKRCVRSKTLWWRWRTRGNAANEERQRRARIAEATAIMAG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCCAGAGGAGAGCCAGAGCAGCCCATCCGGCAAAACGGTGCGTTCGCTCGAAGACATTGTGGTGGAGGTGGCGAACGAGGGGGAATGCTGCTAATGAAGAGAG
GCAAAGAAGGGCTAGAATTGCTGAGGCAACTGCAATCATGGCTGGGGACGCGTTTTTTGGGTCCTCGAGAATCTGTATTAATAATGCGTACACAAGCCATGCAATGGAGG
AAACTCCACAGCCGCTATGGATGCCACCTAAGCTCTGTAGGAGAGAAGTTAGGGAGGTTTTGACACAGAGAGGGACCCATGATCTTCCAATAATTGAGACGCTTAACCAA
AATAGAACACGCAAAAACGCCTCACTTCGGCAAAGACACAACATGAATATGTTGCCGATTGAAAACAGAGCAGGCTCATTCTCGTCTTCATCGGAGAGGGGTTGGAGTTT
TTGTTGGTCAGGGTCAATGTCACAGAAATGGGTGCTTGGTTTGCTTAGTGATCTTCGTAGTGAAGATGAAGATGAAAGGAATGTTGTAAAGGAGACACTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCCAGAGGAGAGCCAGAGCAGCCCATCCGGCAAAACGGTGCGTTCGCTCGAAGACATTGTGGTGGAGGTGGCGAACGAGGGGGAATGCTGCTAATGAAGAGAG
GCAAAGAAGGGCTAGAATTGCTGAGGCAACTGCAATCATGGCTGGGGACGCGTTTTTTGGGTCCTCGAGAATCTGTATTAATAATGCGTACACAAGCCATGCAATGGAGG
AAACTCCACAGCCGCTATGGATGCCACCTAAGCTCTGTAGGAGAGAAGTTAGGGAGGTTTTGACACAGAGAGGGACCCATGATCTTCCAATAATTGAGACGCTTAACCAA
AATAGAACACGCAAAAACGCCTCACTTCGGCAAAGACACAACATGAATATGTTGCCGATTGAAAACAGAGCAGGCTCATTCTCGTCTTCATCGGAGAGGGGTTGGAGTTT
TTGTTGGTCAGGGTCAATGTCACAGAAATGGGTGCTTGGTTTGCTTAGTGATCTTCGTAGTGAAGATGAAGATGAAAGGAATGTTGTAAAGGAGACACTACTTTGA
Protein sequenceShow/hide protein sequence
MKAQRRARAAHPAKRCVRSKTLWWRWRTRGNAANEERQRRARIAEATAIMAGDAFFGSSRICINNAYTSHAMEETPQPLWMPPKLCRREVREVLTQRGTHDLPIIETLNQ
NRTRKNASLRQRHNMNMLPIENRAGSFSSSSERGWSFCWSGSMSQKWVLGLLSDLRSEDEDERNVVKETLL