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CmoCh07G002600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G002600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCtenidin-3-like
Genome locationCmo_Chr07:1276893..1277288
RNA-Seq ExpressionCmoCh07G002600
SyntenyCmoCh07G002600
Gene Ontology termsGO:0006796 - phosphate-containing compound metabolic process (biological process)
GO:0007218 - neuropeptide signaling pathway (biological process)
GO:0019637 - organophosphate metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134728.1 ctenidin-3 [Cucumis sativus]9.4e-5788.37Show/hide
Query:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS
        I   L+A+LLLSP+ SLATAR    GGFDGMFGPGNGF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRN+VVCK KGPCYNKKVTCPAKCFSS
Subjt:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS

Query:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        YSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC

XP_022926656.1 neuropeptide-like protein 31 [Cucurbita moschata]5.8e-67100Show/hide
Query:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
        MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
Subjt:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
Subjt:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

XP_023003427.1 eggshell protein-like [Cucurbita maxima]2.2e-6196.18Show/hide
Query:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
        MAISTLLV V LLSPAFS ATARNS GGGFDGMF PGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
Subjt:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
Subjt:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

XP_023517828.1 cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]8.4e-6698.47Show/hide
Query:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
        MAIS LLVAVLLLSP FSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
Subjt:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
Subjt:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

XP_038881254.1 ctenidin-3 [Benincasa hispida]1.4e-5587.6Show/hide
Query:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS
        I  LL+AVLLLSP+ SLATAR    GGF GMFGPGNGFDDIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR+ VVCKEKGPCYNKKV CPAKCFSS
Subjt:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS

Query:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        YSRSGKGFGGGGGGGGCTIDC KKCI YC
Subjt:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ2 Uncharacterized protein4.5e-5788.37Show/hide
Query:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS
        I   L+A+LLLSP+ SLATAR    GGFDGMFGPGNGF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRN+VVCK KGPCYNKKVTCPAKCFSS
Subjt:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS

Query:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        YSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC

A0A5A7UGS4 Ctenidin-3-like1.9e-5585.27Show/hide
Query:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS
        I   L+A+LLLSP+ SLAT+R    GGF GMFGPGNGFDDIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSS
Subjt:  ISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSS

Query:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        YSRSGKG+GGGGGGGGCTIDC KKCIGYC
Subjt:  YSRSGKGFGGGGGGGGCTIDCTKKCIGYC

A0A5D3CRS6 Ctenidin-3-like1.1e-5587.2Show/hide
Query:  LVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        L+A+LLLSP+ SLAT+R    GGF GMFGPGNGFDDIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSRS
Subjt:  LVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCTKKCIGYC
        GKG+GGGGGGGGCTIDC KKCIGYC
Subjt:  GKGFGGGGGGGGCTIDCTKKCIGYC

A0A6J1EFI3 neuropeptide-like protein 312.8e-67100Show/hide
Query:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
        MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
Subjt:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
Subjt:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

A0A6J1KMH9 eggshell protein-like1.0e-6196.18Show/hide
Query:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
        MAISTLLV V LLSPAFS ATARNS GGGFDGMF PGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF
Subjt:  MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
Subjt:  SSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)1.8e-1845.99Show/hide
Query:  TLLVAVLLLSPAFSLATARNSGGGGFDGM--------FGPGNGFDDIPGFGKGWDKGII--GGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVT
        T+L+  L LS +       +S  G +           +  G G    PG       G I  G G GG Y    GGY KG  +R TV+C+EKG CY KK+T
Subjt:  TLLVAVLLLSPAFSLATARNSGGGGFDGM--------FGPGNGFDDIPGFGKGWDKGII--GGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVT

Query:  CPAKCFSSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        CPAKCF S SR GKG+  GGGGGGCTIDC KKC+ YC
Subjt:  CPAKCFSSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC

AT4G21620.1 glycine-rich protein1.1e-3661.6Show/hide
Query:  LVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        L+ ++L+S   S      + G GF G+  PG+GF  IPGFG G+    +GGGYGGG+GGP GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRS
Subjt:  LVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCTKKCIGYC
        GKG+GGGGGGGGCT+DC KKCI YC
Subjt:  GKGFGGGGGGGGCTIDCTKKCIGYC

AT4G21620.2 glycine-rich protein4.1e-2676.56Show/hide
Query:  GGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC
        GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKG+GGGGGGGGCT+DC KKCI YC
Subjt:  GGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCTKKCIGYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCTCCACTCTTCTCGTCGCCGTCCTCCTTCTCTCGCCGGCCTTCTCTCTCGCCACCGCTCGGAACAGCGGAGGCGGCGGCTTCGATGGGATGTTCGGACCTGG
TAATGGATTTGACGACATACCCGGCTTTGGAAAGGGCTGGGATAAGGGCATCATCGGTGGAGGATATGGCGGTGGCTACGGCGGCCCCAAAGGTGGATACGGGAAGGGCG
GGATCATAAGGAACACTGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGTTTCTCCTCCTACAGCCGATCGGGGAAGGGCTTC
GGCGGCGGAGGCGGAGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTATTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCTCCACTCTTCTCGTCGCCGTCCTCCTTCTCTCGCCGGCCTTCTCTCTCGCCACCGCTCGGAACAGCGGAGGCGGCGGCTTCGATGGGATGTTCGGACCTGG
TAATGGATTTGACGACATACCCGGCTTTGGAAAGGGCTGGGATAAGGGCATCATCGGTGGAGGATATGGCGGTGGCTACGGCGGCCCCAAAGGTGGATACGGGAAGGGCG
GGATCATAAGGAACACTGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGTTTCTCCTCCTACAGCCGATCGGGGAAGGGCTTC
GGCGGCGGAGGCGGAGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTATTGTTAG
Protein sequenceShow/hide protein sequence
MAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGF
GGGGGGGGCTIDCTKKCIGYC