; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G003170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G003170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLeucyl-tRNA synthetase
Genome locationCmo_Chr07:1514233..1516146
RNA-Seq ExpressionCmoCh07G003170
SyntenyCmoCh07G003170
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8030224.1 hypothetical protein BT93_E2615 [Corymbia citriodora subsp. variegata]2.1e-1045.45Show/hide
Query:  LAKADSWVTEEVEGTRFNTGISATMEFVNMAYRDTQNCWHTSPSPRSM-----------VEETCTEEEAFQLAEQDEKVS-----------MWPAGKILN
        L K  + VTEEVEGTRFNTGISA MEF+N AY+   N    S     +           VEE CTEE+AF+LA +D+K+S           ++  GKILN
Subjt:  LAKADSWVTEEVEGTRFNTGISATMEFVNMAYRDTQNCWHTSPSPRSM-----------VEETCTEEEAFQLAEQDEKVS-----------MWPAGKILN

Query:  VIMNRQGSNV
        VI++RQ   V
Subjt:  VIMNRQGSNV
KAG6594677.1 Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1593.75Show/hide
Query:  MVEETCTEEEAFQLAEQDEKVSMWPAGKILNVIMNRQGSNVACSNCTI
        MVEETCTEEEAFQLAEQD+KVSMWPAGKILNVIMNRQGSNVACSN T+
Subjt:  MVEETCTEEEAFQLAEQDEKVSMWPAGKILNVIMNRQGSNVACSNCTI
KAG7033965.1 Leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VEETCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S V+
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
XP_022949941.1 leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata]2.3e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VEETCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S V+
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
XP_023544274.1 leucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]2.3e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VEETCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S V+
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
TrEMBL top hitse value%identityAlignment
A0A1S3B071 Leucyl-tRNA synthetase1.5e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VE+TCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S VA
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
A0A5D3CM74 Leucyl-tRNA synthetase1.5e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VE+TCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S VA
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
A0A6J1BX28 Leucyl-tRNA synthetase4.3e-0934.94Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------
        D  PT      L K    VTEEVEGTRFNTGISA MEF+N+AY+                        +  W       S+                   
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------

Query:  --------------VEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VEETCTEE+AFQLA+QDEK+S           ++  GKILNVI++RQ + VA
Subjt:  --------------VEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
A0A6J1GDF8 Leucyl-tRNA synthetase1.1e-0936.75Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K    VTEEVEGTRFNTGISA MEFVN+AY+                        +  W    H+      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
                      VEETCTEE+AFQ+AEQDEK+S           ++  GKILNVI++RQ S V+
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVA
W9RY36 Leucyl-tRNA synthetase1.9e-0935.12Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------
        D  PT      L K  + VTEE+EGTRFNTGISA MEF+N+AY+                        +  W    HT      P P++           
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCW----HT-----SPSPRS-----------

Query:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVACS
                      VEETCTEE+AFQLA QDEK+S           ++  GKILNVI++R+ + V  S
Subjt:  -------------MVEETCTEEEAFQLAEQDEKVS-----------MWPAGKILNVIMNRQGSNVACS
SwissProt top hitse value%identityAlignment
Q9XEA0 Leucine--tRNA ligase, chloroplastic/mitochondrial1.9e-0629.7Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------
        D  PT      L K  + VTEE+E TRFNTGIS  MEFVN AY+                        +  W     P S+                   
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------

Query:  --------------VEETCTEEEAFQLAEQDEKV-----------SMWPAGKILNVIMNRQGSNV
                      VEE C+E++AF LA QD+K+            ++  GKILNVI++R    V
Subjt:  --------------VEETCTEEEAFQLAEQDEKV-----------SMWPAGKILNVIMNRQGSNV
Arabidopsis top hitse value%identityAlignment
AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein1.4e-0729.7Show/hide
Query:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------
        D  PT      L K  + VTEE+E TRFNTGIS  MEFVN AY+                        +  W     P S+                   
Subjt:  DFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYR----------------------DTQNCWHTSPSPRSM-------------------

Query:  --------------VEETCTEEEAFQLAEQDEKV-----------SMWPAGKILNVIMNRQGSNV
                      VEE C+E++AF LA QD+K+            ++  GKILNVI++R    V
Subjt:  --------------VEETCTEEEAFQLAEQDEKV-----------SMWPAGKILNVIMNRQGSNV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAATTTGATGATTTTACACCCACGGGAACAGGGGAAGCTCCACTTGCAAAAGCAGATTCTTGGGTAACCGAAGAAGTTGAAGGGACACGGTTCAACACAGGAAT
CTCAGCTACTATGGAGTTCGTTAACATGGCATATAGGGACACACAGAATTGTTGGCATACGAGTCCTTCCCCGAGATCAATGGTTGAGGAAACATGTACAGAAGAGGAAG
CTTTCCAGCTAGCAGAACAGGATGAAAAAGTCTCCATGTGGCCTGCTGGCAAGATCTTGAATGTTATAATGAATCGTCAAGGCTCCAATGTGGCCTGCTCAAACTGTACA
ATTTGCTGCAACCACCGAAATCTCTCGCAGATGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATTACTCTGTTTCGCACCCAATCGGCTGGAATGCATTTGGATTGCCTGCGGAACAATAGGCTATTGAGGTTTGCTCTTCCAGCTTCCAGTTAGCTTACAATGC
CTGAATTTGATGATTTTACACCCACGGGAACAGGGGAAGCTCCACTTGCAAAAGCAGATTCTTGGGTAACCGAAGAAGTTGAAGGGACACGGTTCAACACAGGAATCTCA
GCTACTATGGAGTTCGTTAACATGGCATATAGGGACACACAGAATTGTTGGCATACGAGTCCTTCCCCGAGATCAATGGTTGAGGAAACATGTACAGAAGAGGAAGCTTT
CCAGCTAGCAGAACAGGATGAAAAAGTCTCCATGTGGCCTGCTGGCAAGATCTTGAATGTTATAATGAATCGTCAAGGCTCCAATGTGGCCTGCTCAAACTGTACAATTT
GCTGCAACCACCGAAATCTCTCGCAGATGGTATAATAAGCCGATGGACGCATGCAACAGATTATCAATGAAGTCTTGTGCTTTAATCGGAATGATTGAGCTTACTGGGTG
GGAATAGAAAAGTTCCTGCTATTACAACTCGATCATCAATAAGACGACGTTGTGGCTCGATTCTTACATTGGTATCTTGGTTGTCGTTGAGAATTGTTGAGAGGAGTCTC
ACATCGGCTAATCATGAGTTTACAAGTAAAGAATACATTTCCACTGACATAAGGTCGGTAAAGGAGACCAAAAGCAAAGCTGGGTGAGTTTGAGCTCTTTTCATCCCGGT
TGAGACATTTTGTTTGGTTCGTTGAATGATATGTCATGCTCTATCTTCTAAGAAAAAAAAAATCATAGTTTATAGTTGTGATGTATATCTCTTAATTATTGCAATAAGTT
CAGTATAAATGTTGTATTAAATATGTTTGTCAACGGGTGTGGAGCTGGCCAACGCGTACATATATTTGTTAAATTTTCTCTTACATCTCAAAATTCAGAAAATTATACAT
TAAA
Protein sequenceShow/hide protein sequence
MPEFDDFTPTGTGEAPLAKADSWVTEEVEGTRFNTGISATMEFVNMAYRDTQNCWHTSPSPRSMVEETCTEEEAFQLAEQDEKVSMWPAGKILNVIMNRQGSNVACSNCT
ICCNHRNLSQMV