CuGenDBv2

Gene ID	CmoCh07G003470
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr07:1618406..1618948
RNA-Seq Expression	CmoCh07G003470
Synteny	CmoCh07G003470
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008470 - Uncharacterised protein family Ycf33

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6594703.1 hypothetical protein SDJN03_11256, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-88

98.33

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTP+RSPF+PLASSS PKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

KAG7026669.1 hypothetical protein SDJN02_10672, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-87

97.78

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLI INVPTP+RSPF+PLASSS PKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

XP_022926795.1 uncharacterized protein LOC111433802 [Cucurbita moschata]

4.0e-90

100

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

XP_023003383.1 uncharacterized protein LOC111497006 [Cucurbita maxima]

8.8e-90

99.44

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWP+DLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

XP_023518006.1 uncharacterized protein LOC111781569 [Cucurbita pepo subsp. pepo]

2.8e-88

97.78

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTS+NPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSP NTWPSDLKAIEAHP+ESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPI ELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHP7 Uncharacterized protein ycf33

3.5e-60

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATS  T      FPT K P IS P  PI   +P+R+PFRPLASS+PP+SPAK  K   P+D K IEA P   SRFLIIGAVSVGVALFL+G DGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYA+YA+TVS+GA+YTILLPILELLKNPITAVLVL IFGG IFIISQVLSAMVGV EFSY+Y Y
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

A0A6J1EM42 Uncharacterized protein ycf33

1.9e-90

100

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

A0A6J1GE79 Uncharacterized protein ycf33

1.3e-65

78.45

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Query:  MATSLRTRI-HFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERAL
        MATS R+RI H  I PT KNP +SPP  PI   +PLR  FRPLA+S+PP+SPAK  K   P D K I+  PI +SRFLIIGAVSVGVALFLMG DG+RAL
Subjt:  MATSLRTRI-HFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPI ELLKNPITAVLVLAIFGG IF+ISQVLSAMVGVNEFSY+YAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

A0A6J1IVK7 Uncharacterized protein ycf33

4.8e-65

77.9

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Query:  MATSLRTRI-HFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERAL
        MATS R+RI HF I PT K+P +SPP  PI   +PLR PFRPLA+S+PP+S AK  K   P D K I+  PI +SRFLIIGAVSVGVALFLMG +GERAL
Subjt:  MATSLRTRI-HFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTILLPILELLKNPITAVLVLAI GG IF+ISQVLSAMVGVNEFSY+YAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

A0A6J1KWC7 Uncharacterized protein ycf33

4.3e-90

99.44

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Query:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
        MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWP+DLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA
Subjt:  MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16410.1 unknown protein

3.3e-34

62.62

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Query:  RFLIIGAVSVGVALFL-MGSDGERALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNE
        R+ ++G VSVG+ + L +G D E+A+ALGPEGPL+EEFWDNVRRY +YA+TVS+GAL  +  PI ELLKNPI+A+L+L I GG+ +I+SQV+SAM+GVNE
Subjt:  RFLIIGAVSVGVALFL-MGSDGERALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNE

Query:  FSYEYAY
        F+Y+Y+Y
Subjt:  FSYEYAY

Sequences

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CDS sequence

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ATGGCCACCTCTCTCAGAACTCGAATCCACTTCTCAATCTTCCCCACTTCAAAAAACCCACCAATTTCTCCCCCTTTAATTCCGATCAACGTCCCGACCCCTCTTAGAAG
CCCTTTCCGGCCACTTGCATCCTCTTCGCCGCCGAAATCTCCGGCCAAATCCCCGAAGAATACTTGGCCATCAGATCTCAAGGCAATCGAAGCACACCCAATCGAGAGCT
CGAGGTTTCTGATCATCGGAGCCGTTTCAGTGGGCGTTGCCCTGTTTCTGATGGGTTCCGACGGGGAAAGGGCTTTGGCTTTGGGCCCTGAAGGGCCTTTGGTGGAGGAA
TTTTGGGACAATGTTAGAAGATACGCGATTTACGCGGTTACTGTGAGTAGTGGTGCTCTTTACACTATCCTTCTCCCCATTTTGGAGCTGCTGAAGAACCCCATTACTGC
TGTTCTTGTTTTAGCTATTTTTGGGGGTACCATTTTCATTATCTCTCAAGTGCTTTCTGCTATGGTTGGTGTCAATGAGTTTTCTTATGAATATGCCTATTGA

mRNA sequence

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Protein sequence

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MATSLRTRIHFSIFPTSKNPPISPPLIPINVPTPLRSPFRPLASSSPPKSPAKSPKNTWPSDLKAIEAHPIESSRFLIIGAVSVGVALFLMGSDGERALALGPEGPLVEE
FWDNVRRYAIYAVTVSSGALYTILLPILELLKNPITAVLVLAIFGGTIFIISQVLSAMVGVNEFSYEYAY

CmoCh07G003470 (gene) of Cucurbita moschata (Rifu) v1 genome