| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 6.1e-111 | 98.19 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGLQYAKRANHYVNTE VRPVLETLKKYGVADSEICVIANVCPDTTDEVF+LVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVL ELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| XP_022926857.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita moschata] | 3.9e-113 | 100 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVLIELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| XP_022926859.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 [Cucurbita moschata] | 1.2e-109 | 98.19 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKD GKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVLIELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| XP_023003382.1 DNA-directed RNA polymerases IV and V subunit 4-like [Cucurbita maxima] | 2.9e-108 | 95.93 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKS ASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDA INLS+KF GKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGLQYAKRANHYVNTE VRPVLETLKKYGVADSEICVIANVCPDT DEVF+LVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVL ELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| XP_023517145.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 4.0e-110 | 97.74 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIE EL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGLQYAKRANHYVNTE VRPVLETLKKYGVADSEICVIANVCPDTTDEVF+LVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVL ELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 1.3e-95 | 86.43 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGF VQK+P KSSLKSSA KDASLKGKDDSLSK KKGRKVQFDAQGSVDA S+K+SGKNGDLGKGGKG N KAS++KE Q LELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LSADPTIKIPTSFDRGLQYAKRANHYVN E VRPVLETLKKYGV DSEICVIANVCPDTTDEVF+L+PSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKL+EP+NNVL ELAK+KSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 2.7e-96 | 86.88 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGF VQKKP KSSLKSSA KDASLKGKDDSLSK KKGRKVQFDAQGSVDA + S+K+SGKNGD+GKGGKG N KASV+KE Q LELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LSADPTIKIPTSFDRGLQYAKRANHYVN E VRPVLETLKKYG+ DSEICVIANVCPDTTDEVF+L+PSLK+K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKL+EPLNNVL ELAK+KSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| A0A6J1EGC4 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 | 5.6e-110 | 98.19 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKD GKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVLIELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 1.9e-113 | 100 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVLIELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 1.4e-108 | 95.93 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
MSEKGEKGFPVQKKPGKSSLKS ASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDA INLS+KF GKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQINLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGLQYAKRANHYVNTE VRPVLETLKKYGVADSEICVIANVCPDT DEVF+LVPSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSLKSK
Query: RSKLTEPLNNVLIELAKLKSS
RSKLTEPLNNVL ELAKLKSS
Subjt: RSKLTEPLNNVLIELAKLKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O48890 DNA-directed RNA polymerase II subunit 4 | 3.7e-18 | 36.5 | Show/hide |
Query: SVSKEQQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVC
S +E+ ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N + VR V E L ++ + + E+CV+ N+C
Subjt: SVSKEQQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVC
Query: PDTTDEVFSLVPSLKSK-RSKLTEPLNNVLIELAKLK
P+T +E ++VPSLK+K R+ E + +L +L+ +K
Subjt: PDTTDEVFSLVPSLKSK-RSKLTEPLNNVLIELAKLK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 9.5e-06 | 28.48 | Show/hide |
Query: KASVSKEQQPLELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQMALLSADPTI----------KIPTSFDRGLQYAKRANHYVNTELVRPVLETLKK
++ + +E+ LK ++L K+ K L++ E A LL+ GI + T+ I +F + L YA++ + Y N ++ V L K
Subjt: KASVSKEQQPLELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQMALLSADPTI----------KIPTSFDRGLQYAKRANHYVNTELVRPVLETLKK
Query: YGVADSEICVIANVCPDTTDEVFSLVPSLKSKRSKLTEPLNNVLIELAKLK
+ + EI +AN+CP+ +DE SL+PSLK + L +L EL+ L+
Subjt: YGVADSEICVIANVCPDTTDEVFSLVPSLKSKRSKLTEPLNNVLIELAKLK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 3.7e-34 | 45.54 | Show/hide |
Query: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQ---INLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIE
MSEKG KG KSSLK SKD GKD S +K KKGRK+ FD Q + A +N+S K GK K+S ELK
Subjt: MSEKGEKGFPVQKKPGKSSLKSSASKDASLKGKDDSLSKSKKGRKVQFDAQGSVDAQ---INLSLKFSGKNGDLGKGGKGINGGKASVSKEQQPLELKIE
Query: QELPKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSL
+LP+N +C+MDCEA Q+L GI+ Q+ LS DP+IKIP S+DR L Y + HY N + VR VLE LK YG++D E+CVIAN ++ DEV + +PSL
Subjt: QELPKNVKCQCLMDCEAAQLLQGIQDQMALLSADPTIKIPTSFDRGLQYAKRANHYVNTELVRPVLETLKKYGVADSEICVIANVCPDTTDEVFSLVPSL
Query: KSKRSKLTEPLNNVLIELAKLKSS
K+K+ + +PL + L EL+KLK S
Subjt: KSKRSKLTEPLNNVLIELAKLKSS
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