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CmoCh07G004080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G004080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncell cycle checkpoint protein RAD17
Genome locationCmo_Chr07:1871799..1874129
RNA-Seq ExpressionCmoCh07G004080
SyntenyCmoCh07G004080
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603897.1 Cell cycle checkpoint protein RAD17, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLV+LSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
XP_022950385.1 cell cycle checkpoint protein RAD17 [Cucurbita moschata]5.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLV+LSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
XP_023544182.1 cell cycle checkpoint protein RAD17 [Cucurbita pepo subsp. pepo]5.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLV+LSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
XP_038880799.1 cell cycle checkpoint protein RAD17 isoform X1 [Benincasa hispida]5.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLVLLSSDEEYCGGRSSSS+R  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
XP_038880800.1 cell cycle checkpoint protein RAD17 isoform X2 [Benincasa hispida]5.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLVLLSSDEEYCGGRSSSS+R  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
TrEMBL top hitse value%identityAlignment
A0A0A0KKS1 Uncharacterized protein5.3e-0482.86Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENN  LLSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
A0A6J1GFK3 cell cycle checkpoint protein RAD172.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLV+LSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
A0A6J1IKZ8 cell cycle checkpoint protein RAD172.8e-0585.71Show/hide
Query:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
        M+KKENNLV+LSSDEEYCGGRSSSSKR  RKTKS+
Subjt:  MSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGGCTCGTGAAAGTTCGTTGTAGGCCGATTTGTGATTCCGAACTCAGGAATGGTGTTGATACCATCTTCGTTGCGTTGTATGTTTCTCTAAATTTTTCTTCCGT
TTCTTGGAGGATGTCGAAGAAGGAGAACAATCTGGTTTTACTATCGTCGGATGAAGAATACTGTGGTGGTCGATCATCCAGTTCGAAACGCAGTAATCGAAAGACGAAAT
CGGAAGAGATATCGGCAAGTGAAGAAGTCTCGAATCTTAGTTGTTGCTCTGAAGAAAAACTTGCGTTGGACCAGCAATTTTGTCTTATTGTCTCTAGCTCTGTTCTTACG
TGTCGCGAGATGTTGATAACGAGGAAGGATTTGGATTTTTCCAATGTACAAGATGGTAAAACAAAGATCTATCGCTTATCGTGGACTCAGCTTTTAGTTGATTTTTCAGT
AGTGTCCACAGACTACCTACCTGCATTGAAGTGGCTGGGTAGCAGGGCACCGGGCGTCACGAAAATTTTAGGAAATCCTTTTGCCTATTCATTTAAGACGGTGTCTGAAC
TCTTGGGAATCAGCTTCCGGCAGATGTTTCTCAGAGGTGTTGTCATTGAAACTTTCGAGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGGCTCGTGAAAGTTCGTTGTAGGCCGATTTGTGATTCCGAACTCAGGAATGGTGTTGATACCATCTTCGTTGCGTTGTATGTTTCTCTAAATTTTTCTTCCGT
TTCTTGGAGGATGTCGAAGAAGGAGAACAATCTGGTTTTACTATCGTCGGATGAAGAATACTGTGGTGGTCGATCATCCAGTTCGAAACGCAGTAATCGAAAGACGAAAT
CGGAAGAGATATCGGCAAGTGAAGAAGTCTCGAATCTTAGTTGTTGCTCTGAAGAAAAACTTGCGTTGGACCAGCAATTTTGTCTTATTGTCTCTAGCTCTGTTCTTACG
TGTCGCGAGATGTTGATAACGAGGAAGGATTTGGATTTTTCCAATGTACAAGATGGTAAAACAAAGATCTATCGCTTATCGTGGACTCAGCTTTTAGTTGATTTTTCAGT
AGTGTCCACAGACTACCTACCTGCATTGAAGTGGCTGGGTAGCAGGGCACCGGGCGTCACGAAAATTTTAGGAAATCCTTTTGCCTATTCATTTAAGACGGTGTCTGAAC
TCTTGGGAATCAGCTTCCGGCAGATGTTTCTCAGAGGTGTTGTCATTGAAACTTTCGAGTTCTGACTTCTGAGTAGAAAACTTTCCCCCGGTTGAATTCACATCTATGCA
CAGGAATTGGTCCGAATAATCTCTCTTGATCCGGATCTTGTCATCACGGTAGTAATCTCTTCACCTCATGCTGG
Protein sequenceShow/hide protein sequence
MGWLVKVRCRPICDSELRNGVDTIFVALYVSLNFSSVSWRMSKKENNLVLLSSDEEYCGGRSSSSKRSNRKTKSEEISASEEVSNLSCCSEEKLALDQQFCLIVSSSVLT
CREMLITRKDLDFSNVQDGKTKIYRLSWTQLLVDFSVVSTDYLPALKWLGSRAPGVTKILGNPFAYSFKTVSELLGISFRQMFLRGVVIETFEF