; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G004540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G004540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr07:2081908..2083778
RNA-Seq ExpressionCmoCh07G004540
SyntenyCmoCh07G004540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023003078.1 uncharacterized protein LOC111496792 isoform X1 [Cucurbita maxima]1.7e-3668.33Show/hide
Query:  RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN-----------------------------------
        RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYK+IGTILRDMIFQKDPHLCQKPAGLEPTN                                   
Subjt:  RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN-----------------------------------

Query:  -IFLLVHSALPSVHESFICY
         +FLLVHSALPSVHESFICY
Subjt:  -IFLLVHSALPSVHESFICY
XP_023517739.1 uncharacterized protein LOC111781410 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-3390.67Show/hide
Query:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSA
        KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN   ++ S+
Subjt:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSA
XP_023517740.1 uncharacterized protein LOC111781410 isoform X2 [Cucurbita pepo subsp. pepo]6.3e-44100Show/hide
Query:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSALPSVHESFICY
        KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSALPSVHESFICY
Subjt:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSALPSVHESFICY
XP_023517741.1 uncharacterized protein LOC111781410 isoform X3 [Cucurbita pepo subsp. pepo]2.5e-32100Show/hide
Query:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN
        KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN
Subjt:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN
XP_023517742.1 uncharacterized protein LOC111781410 isoform X4 [Cucurbita pepo subsp. pepo]4.4e-21100Show/hide
Query:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQ
        KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQ
Subjt:  KHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQ
TrEMBL top hitse value%identityAlignment
A0A6J1KVF7 uncharacterized protein LOC111496792 isoform X18.1e-3768.33Show/hide
Query:  RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN-----------------------------------
        RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYK+IGTILRDMIFQKDPHLCQKPAGLEPTN                                   
Subjt:  RDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTN-----------------------------------

Query:  -IFLLVHSALPSVHESFICY
         +FLLVHSALPSVHESFICY
Subjt:  -IFLLVHSALPSVHESFICY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATCTACAACGCACCGAGAGGAAAAGAGGCTCCTATTTATGATCTATTCCAAGCATCTGTTACCACAACCAAAGCAGCAGAGGAGCTCATTCCCAAGCACAGGGA
TTTTGACTGTATTGTGGCTAAAGCCAAAGCAAACCAACAAGAGCTGCATTTGTGGAGTGGAGTGGTCCGATTTCGTAAGGAAATGGTACATCTTCCATGGTACAAAATCA
TAGGAACAATATTAAGGGACATGATTTTTCAGAAAGATCCTCACTTGTGTCAGAAACCAGCTGGCCTTGAACCAACAAACATCTTCCTGCTTGTCCATTCCGCCCTGCCT
TCCGTTCACGAATCTTTCATCTGTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATCTACAACGCACCGAGAGGAAAAGAGGCTCCTATTTATGATCTATTCCAAGCATCTGTTACCACAACCAAAGCAGCAGAGGAGCTCATTCCCAAGCACAGGGA
TTTTGACTGTATTGTGGCTAAAGCCAAAGCAAACCAACAAGAGCTGCATTTGTGGAGTGGAGTGGTCCGATTTCGTAAGGAAATGGTACATCTTCCATGGTACAAAATCA
TAGGAACAATATTAAGGGACATGATTTTTCAGAAAGATCCTCACTTGTGTCAGAAACCAGCTGGCCTTGAACCAACAAACATCTTCCTGCTTGTCCATTCCGCCCTGCCT
TCCGTTCACGAATCTTTCATCTGTTACTGAACTGTTAATGACGCTGCCATGGACCCATTGAGAATTAAAAAGATGGGTCGAGATTTGTTTAATGGGAGATTAAACTAAAT
GATCTTTACGGATCTAAGCGACCCATGTGTCGTGGTGGTGGAATTGGCAAAAAGGAACAATAAAGCAGAGTTATTCAATTTCCATTAACTTTGTTCCTTCGTTGTTTAAT
TTTGTATTTGTTTTTTGAGGTGCCTTCGATGGCGGAAAGAGTGGGATAAGGAGATTGGAACCCTAGAACACCGCCGCTTTACGGCCCCACGCCGCCTAGTTGGAGGGCAA
TGGTCCGCCCTCGTCCCCCAGGTATCGGCCCTTCGTAATTTAATTTACTTCTCATCTTGTTAATTTTTCCTTCGTAATTTTTCCTCTCATTTAAAATAAAAAAATACCTT
TATTATTAGTGAATTTTAACATTACATTTTAGCTTTTTATTTAAAGAAATTATTGTCAACATATAAATAAAATCCATATTTTCATATGAGTAAAACAAATTAAACTTTTT
CTAAAAAAAAGTTAAAATTAATATTATCACACTTTTTTTTACTTTTTAAAAAAGTTTATAAAGACATTTAAAAAATTCA
Protein sequenceShow/hide protein sequence
MQIYNAPRGKEAPIYDLFQASVTTTKAAEELIPKHRDFDCIVAKAKANQQELHLWSGVVRFRKEMVHLPWYKIIGTILRDMIFQKDPHLCQKPAGLEPTNIFLLVHSALP
SVHESFICY