CuGenDBv2

Gene ID	CmoCh07G004560
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein translocase subunit
Genome location	Cmo_Chr07:2088890..2092532
RNA-Seq Expression	CmoCh07G004560
Synteny	CmoCh07G004560
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6594801.1 hypothetical protein SDJN03_11354, partial [Cucurbita argyrosperma subsp. sororia]

8.6e-85

99.42

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAF SPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQ
        IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQ
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQ

KAG7026769.1 hypothetical protein SDJN02_10775 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-90

98.9

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAF SPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLE+EKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

XP_022963246.1 uncharacterized protein LOC111463516 [Cucurbita moschata]

6.2e-91

100

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]

1.5e-84

93.96

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAF SPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTR PKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIR RRAFILAEKKKR+AQLQEA KKK+IKRVERKMAAVAR+RAWA RLAELQ+LE+EKKKSM+
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

XP_023518561.1 uncharacterized protein LOC111782028 [Cucurbita pepo subsp. pepo]

1.5e-89

98.35

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAF SPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQ+QLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLE+EKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUQ0 Uncharacterized protein

9.7e-66

76.37

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRS +RPLTR   S PF+S T  PSAF   K GF+L S G+V T  PWFPI+NHF+SLT+TR PKRRPS KPRRKRASLRPPGPYAWV YTPG+P
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        I PNQPNEGSVKRRNEKKRIR  RAFI++E+KKR+AQ+QEANKKK++ RVERKMAAVAR+RAWA RLAELQ+LE+EKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

A0A1S3CSD0 uncharacterized protein LOC103504316

8.2e-65

74.73

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRS +RPLTR   S PF+S T  PSAF   K GF+L S G+V T  PWFPI+NHF+SLTDTRFPKRRPS KPRR+RASL+PPGPYAWV YTPG+P
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        I PN PNEGSVKRRNEKKRIR  RAFI++E++KR+AQ+QEAN+KK++ RVERKMAAVAR+RAWA RLAELQ+LE+EKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

A0A6J1BTI2 uncharacterized protein LOC111005424

1.1e-74

84.07

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLG+LRS +RPLTRTL SRP TSLTP P+AF SP+  F+L S G+VGT+APWFPI+NHF+SLTDTRFPKRRPSDKPRRKRASLRPPGPYAWV+YTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        I PNQPNEGSVKRRNEKKRIR RRAFILAEKKKR+AQ QEA KKK+IKRVERKMAAVAR+RAWAQRLAELQ+LE+E+KKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

A0A6J1HFM5 uncharacterized protein LOC111463516

3.0e-91

100

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

A0A6J1KV00 uncharacterized protein LOC111496683

7.1e-85

93.96

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
        MGLGILRSALRPLTRTLGSRPFTSLTPSPSAF SPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTR PKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEP

Query:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME
        IQPNQPNEGSVKRRNEKKRIR RRAFILAEKKKR+AQLQEA KKK+IKRVERKMAAVAR+RAWA RLAELQ+LE+EKKKSM+
Subjt:  IQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51010.1 unknown protein

1.2e-52

62.9

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Query:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSL---GAVGTKAPWFPISNHFN--SLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKY
        MG G +RS LRPL+RTL SR   + + +P     P +   L S         + PW P++NHF+  SLTDTR PKRRP   P+RKR+ L+PPGPYA+V+Y
Subjt:  MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSL---GAVGTKAPWFPISNHFN--SLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKY

Query:  TPGEPIQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSM
        TPG+PI  N PNEGSVKRRN KKRI QRRAFIL+EKKKRQA +QEA +KK IK+VERKMAAVARDRAWA+RL ELQ+LE+EKKKSM
Subjt:  TPGEPIQPNQPNEGSVKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSM

Sequences

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CDS sequence

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ATGGGGCTTGGAATCCTAAGATCAGCTCTCCGACCGTTAACGAGGACCTTGGGATCACGTCCCTTCACTTCCCTGACACCATCTCCGTCCGCTTTCATTTCCCCTAAATC
GGGGTTTAATCTCCGTTCTCTTGGTGCAGTGGGAACTAAAGCTCCTTGGTTCCCAATTTCGAACCATTTCAACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCA
GTGATAAACCTCGTCGGAAGAGGGCCAGCTTGAGACCCCCTGGGCCTTACGCTTGGGTTAAATATACCCCTGGGGAGCCTATTCAGCCTAATCAACCGAATGAAGGAAGC
GTGAAAAGAAGGAATGAGAAGAAACGCATTAGGCAGCGCCGCGCGTTTATCCTGGCTGAAAAAAAGAAGCGACAAGCTCAACTTCAAGAGGCAAACAAAAAGAAAATGAT
CAAGAGAGTTGAACGAAAGATGGCTGCAGTAGCAAGGGATAGAGCATGGGCTCAAAGATTGGCCGAACTGCAACGGCTCGAAGACGAGAAGAAAAAATCTATGGAATAG

mRNA sequence

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GGGCACGCCTCCGCATCCCTACCTCCGTCTTCCTCAACCTCCCTCCGCCATTTCGATCAACTACAGAGATGGGGCTTGGAATCCTAAGATCAGCTCTCCGACCGTTAACG
AGGACCTTGGGATCACGTCCCTTCACTTCCCTGACACCATCTCCGTCCGCTTTCATTTCCCCTAAATCGGGGTTTAATCTCCGTTCTCTTGGTGCAGTGGGAACTAAAGC
TCCTTGGTTCCCAATTTCGAACCATTTCAACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGTGATAAACCTCGTCGGAAGAGGGCCAGCTTGAGACCCCCTG
GGCCTTACGCTTGGGTTAAATATACCCCTGGGGAGCCTATTCAGCCTAATCAACCGAATGAAGGAAGCGTGAAAAGAAGGAATGAGAAGAAACGCATTAGGCAGCGCCGC
GCGTTTATCCTGGCTGAAAAAAAGAAGCGACAAGCTCAACTTCAAGAGGCAAACAAAAAGAAAATGATCAAGAGAGTTGAACGAAAGATGGCTGCAGTAGCAAGGGATAG
AGCATGGGCTCAAAGATTGGCCGAACTGCAACGGCTCGAAGACGAGAAGAAAAAATCTATGGAATAGATTGTGTGGGCATGGTTTGCTTTTTTTTTTTTTCCCAATAAAA
GAGTTTTATTTCCCAAGTAGATTCTTTTTCTTTTGCTGAATTGAACACGAATGAAACTGTAGTACACAGCTTTAAGAGTAGGGCCATTTTGGTGGTGTCATCATAGACAT
GAGCTTCAGCATTTAAGATAGTAAATCTTTTTTCAACTAATGGAGAAGAAACTGGGTTGCTAATGTCATCTCTGATACGGGTGCTCAGCAAATGGTACTTGAAAGTTGAA
GGATGATCAGAGGAGTGCAGATTAAGCTCTCTCTCCTATAAATTAATCCACACCGACACAGACTGAATTTTTGGGTATTCCCCGACGCCCAAAAAAGGGGGGACAGTAAT
ATGGTGGATGGTTGAATCATGTGAACTGTGATTGTCATGGGAAGAGGACACGCCCACCAGTGGGCTCTACCAACTTCATATCACTACTGACCCACTTAGCCTTGTAATTG
GGGAGAAAGAAAAATGAAGTGCTCTGTTCTCCCCGCATCATTCCAAAAGATCATCCCATAAAAAAGGGTGAAGAATAGAATAATATACTGCAAGCCCTTGAATTAAAAAG
GAGGAGCAGGGAAGGAAAGCAAATGAACTTTATACACTGAGTTGGGTACAATGAATGCTGCTATTGAATGGAGGAGAGGAGGAAATGGACAAGGAAGGACCCGTTTGAAC
TGTCAAAAAGATGGCGACGCACGAACAAGAATCATAATTCAGAATGGTAGAGAGAGCCGAGGTGTGCTCCATGTAAAGTAAAACTAGAATTCCTGTATCAGTACAGTTAT
GGCTTAAAACAGAGGACCCCTCGTGGGTCTGTCTAGCTATATCTATCTCACAGCAAAACAAAAGAAACTTGGGTCATTCAATATATTATATTTACA

Protein sequence

Show/hide protein sequence

MGLGILRSALRPLTRTLGSRPFTSLTPSPSAFISPKSGFNLRSLGAVGTKAPWFPISNHFNSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVKYTPGEPIQPNQPNEGS
VKRRNEKKRIRQRRAFILAEKKKRQAQLQEANKKKMIKRVERKMAAVARDRAWAQRLAELQRLEDEKKKSME

CmoCh07G004560 (gene) of Cucurbita moschata (Rifu) v1 genome