; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G004580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G004580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr07:2097609..2099791
RNA-Seq ExpressionCmoCh07G004580
SyntenyCmoCh07G004580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594803.1 hypothetical protein SDJN03_11356, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2848.63Show/hide
Query:  MDLACGAMYLSSCLPFFIEAFHQTPL--------------------------TKRVHPSAIGSSNRSSSGHPQVILRSPSGHLGVLKLVISYQESINQSQ
        MDLACGAMYLSSCLPFFIEAFHQTP                            +RVHPSAI SSNRSSSGHPQVILRSP                     
Subjt:  MDLACGAMYLSSCLPFFIEAFHQTPL--------------------------TKRVHPSAIGSSNRSSSGHPQVILRSPSGHLGVLKLVISYQESINQSQ

Query:  QMESKVPCHCDSEFWEALGTMGDEVSTTGSKTME-------------------------------DTNEAVTIDNEKELQIGH
                   SEFWEALGTMGDEVST GSKTME                               DTNEAVTIDNEKELQIGH
Subjt:  QMESKVPCHCDSEFWEALGTMGDEVSTTGSKTME-------------------------------DTNEAVTIDNEKELQIGH

KAG7026771.1 hypothetical protein SDJN02_10777, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-6864.68Show/hide
Query:  MDLACGAMYLSSCLPFFIEAFHQTPL--------------------------TKRVHPSAIGSSNRSSSGHPQVILRSPSGHLGVLKLVISYQESINQSQ
        MDLACGAMYLSSCLPFFIEAFHQTP                            KRVHPSAI SSNRSSSGHPQV LRSPSGH                  
Subjt:  MDLACGAMYLSSCLPFFIEAFHQTPL--------------------------TKRVHPSAIGSSNRSSSGHPQVILRSPSGHLGVLKLVISYQESINQSQ

Query:  QMESKVPCHCDSEFWEALGTMGDEVSTTGSKTMEDTNEAVTID-----NEKELQIGH---ELGASGTMAGIKNWGPDNKEFGFESARTKEYVEGDVFKSL
        QMESKVPCHCDSEFWEALGTMGDE+      + E  +  +  D     + K     H   ELGASGT+AGIKNWGPDNKE GFESARTKEYVEGDVFKSL
Subjt:  QMESKVPCHCDSEFWEALGTMGDEVSTTGSKTMEDTNEAVTID-----NEKELQIGH---ELGASGTMAGIKNWGPDNKEFGFESARTKEYVEGDVFKSL

Query:  VPALEVIILEATISSNRRELSKTSVDFFLYKCLCT
        VPALEVIILEATISSNRRELSKTSV+FFLYKCLCT
Subjt:  VPALEVIILEATISSNRRELSKTSVDFFLYKCLCT

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTAGCCTGTGGGGCCATGTACTTGTCCTCGTGTTTGCCGTTCTTCATTGAGGCATTTCATCAAACACCTTTGACAAAAAGAGTCCATCCATCTGCAATAGGATC
ATCCAACAGGTCATCCTCAGGTCATCCTCAGGTCATCCTCAGGTCACCCTCAGGTCACCTGGGAGTTCTTAAGCTTGTTATTTCATATCAAGAAAGTATCAATCAAAGTC
AACAGATGGAATCAAAAGTACCCTGCCATTGTGACTCAGAATTCTGGGAAGCTTTAGGAACTATGGGTGACGAAGTAAGCACCACAGGATCTAAAACAATGGAAGATACC
AATGAAGCTGTCACCATAGACAACGAGAAGGAGCTCCAAATTGGACATGAACTGGGAGCTTCTGGAACCATGGCCGGGATAAAAAATTGGGGTCCTGACAATAAAGAATT
CGGATTCGAATCAGCGAGAACCAAAGAATATGTGGAAGGAGATGTATTCAAGAGCCTCGTACCCGCCCTTGAAGTTATTATATTGGAGGCCACCATTTCATCCAACAGGA
GAGAGCTCAGCAAGACTTCAGTGGACTTTTTCCTCTATAAATGTCTTTGTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTAGCCTGTGGGGCCATGTACTTGTCCTCGTGTTTGCCGTTCTTCATTGAGGCATTTCATCAAACACCTTTGACAAAAAGAGTCCATCCATCTGCAATAGGATC
ATCCAACAGGTCATCCTCAGGTCATCCTCAGGTCATCCTCAGGTCACCCTCAGGTCACCTGGGAGTTCTTAAGCTTGTTATTTCATATCAAGAAAGTATCAATCAAAGTC
AACAGATGGAATCAAAAGTACCCTGCCATTGTGACTCAGAATTCTGGGAAGCTTTAGGAACTATGGGTGACGAAGTAAGCACCACAGGATCTAAAACAATGGAAGATACC
AATGAAGCTGTCACCATAGACAACGAGAAGGAGCTCCAAATTGGACATGAACTGGGAGCTTCTGGAACCATGGCCGGGATAAAAAATTGGGGTCCTGACAATAAAGAATT
CGGATTCGAATCAGCGAGAACCAAAGAATATGTGGAAGGAGATGTATTCAAGAGCCTCGTACCCGCCCTTGAAGTTATTATATTGGAGGCCACCATTTCATCCAACAGGA
GAGAGCTCAGCAAGACTTCAGTGGACTTTTTCCTCTATAAATGTCTTTGTACATAAGCTCTGTGCTTCACCTCCTGTAATCTCAAAAAGCAGAGAGATTTTCATTAACAT
GAAGAAAGAGGAAAGCAATGGATCAAATATTCAATTGTTGGAATACAAATACCAGCTTTTGCAATGAAGAAATA
Protein sequenceShow/hide protein sequence
MDLACGAMYLSSCLPFFIEAFHQTPLTKRVHPSAIGSSNRSSSGHPQVILRSPSGHLGVLKLVISYQESINQSQQMESKVPCHCDSEFWEALGTMGDEVSTTGSKTMEDT
NEAVTIDNEKELQIGHELGASGTMAGIKNWGPDNKEFGFESARTKEYVEGDVFKSLVPALEVIILEATISSNRRELSKTSVDFFLYKCLCT