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CmoCh07G005250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G005250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationCmo_Chr07:2403874..2404325
RNA-Seq ExpressionCmoCh07G005250
SyntenyCmoCh07G005250
Gene Ontology termsNA
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026827.1 hypothetical protein SDJN02_10834, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-5793.44Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAPSA+L AALLFVSFL K N QCFLSNITI QSMTGFQIHGMTEWNTTVSN CLCSQSEVKLDCRGFQTT+SIDPLILAITDTECLVNNGLPIFNSTPI
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TFTYAQNPQFNFKPISSQIACS
Subjt:  TFTYAQNPQFNFKPISSQIACS

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4778.69Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAP  KLFAALLFVS L K N QC  ++I I Q MTGFQIHGMTEWN T+SNNCLCSQSEVKLDC+GFQTTKSIDP ILA+TDTECLVNNGLPIF S P+
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
         FTYAQ+P+F+FK ISSQIACS
Subjt:  TFTYAQNPQFNFKPISSQIACS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]3.1e-62100Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TFTYAQNPQFNFKPISSQIACS
Subjt:  TFTYAQNPQFNFKPISSQIACS

XP_023004032.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima]1.2e-4577.05Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAP AKLFAALLFVS L K N QC  ++I IRQ+M+GFQIHGMTEWN T+SN CLCSQSEVKLDCRGFQTTKSIDP +LA+TD+ECLVNNGLPIF S  I
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TFTYA +P+F+FK ISSQI CS
Subjt:  TFTYAQNPQFNFKPISSQIACS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]2.2e-4778.69Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAP A LFAALLFVS L K N QC  ++I I Q MTGFQIHGMTEWN T+SNNCLCSQSEVKLDCRGFQTTKS+DP ILA+TDTECLVNNGLPIF S P+
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
         FTYAQ+P+F+FK ISSQIACS
Subjt:  TFTYAQNPQFNFKPISSQIACS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein2.0e-4373.5Show/hide
Query:  KLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYA
        KL AALL +S +S  N QCFL+NI I QSMTGFQIHGMTEW  T++NNC+CSQS++KLDC+GF TT SIDP ILAI+D+ECLVNNG PIFNS PITF YA
Subjt:  KLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYA

Query:  QNPQFNFKPISSQIACS
        Q+P+FNFKP+SSQI+CS
Subjt:  QNPQFNFKPISSQIACS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like2.4e-4472.95Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MA S KL AALL +SF+S  N QC L+NITI Q MTGFQIHGMTEW+ T++NNC+CSQS++KLDC+GF TT SIDP IL+I+D ECLVNNG PIFNS PI
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TF YAQ P+FNFKPISSQI+CS
Subjt:  TFTYAQNPQFNFKPISSQIACS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like2.4e-4472.95Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MA S KL AALL +SF+S  N QC L+NITI Q MTGFQIHGMTEW+ T++NNC+CSQS++KLDC+GF TT SIDP IL+I+D ECLVNNG PIFNS PI
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TF YAQ P+FNFKPISSQI+CS
Subjt:  TFTYAQNPQFNFKPISSQIACS

A0A6J1HGA0 uncharacterized protein At1g05835-like1.5e-62100Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TFTYAQNPQFNFKPISSQIACS
Subjt:  TFTYAQNPQFNFKPISSQIACS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like5.7e-4677.05Show/hide
Query:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI
        MAP AKLFAALLFVS L K N QC  ++I IRQ+M+GFQIHGMTEWN T+SN CLCSQSEVKLDCRGFQTTKSIDP +LA+TD+ECLVNNGLPIF S  I
Subjt:  MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPI

Query:  TFTYAQNPQFNFKPISSQIACS
        TFTYA +P+F+FK ISSQI CS
Subjt:  TFTYAQNPQFNFKPISSQIACS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058352.3e-0429.63Show/hide
Query:  EWNTTVSNNC-LCSQSEVKLDCRGFQTTKSIDPLILAITDT---ECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC
        ++   V N C +C    ++L C+GF  +  +DP  L +  +    C+VN+GLP+     ++F Y+   QF  +P+S    C
Subjt:  EWNTTVSNNC-LCSQSEVKLDCRGFQTTKSIDPLILAITDT---ECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC

Q6TLJ2 Protein TAPETUM DETERMINANT 12.3e-0429.07Show/hide
Query:  QCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCL--CSQSEVKLDCRGFQTTKSIDPLIL-AITDTECLVNNGLPIFNSTPITFTYA
        +C  ++I + Q++T    +G+  +   ++N C+  C  S + ++C  F + K I+P +   I   +CLVNNG P+   + ++F YA
Subjt:  QCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCL--CSQSEVKLDCRGFQTTKSIDPLIL-AITDTECLVNNGLPIFNSTPITFTYA

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein1.7e-0529.63Show/hide
Query:  EWNTTVSNNC-LCSQSEVKLDCRGFQTTKSIDPLILAITDT---ECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC
        ++   V N C +C    ++L C+GF  +  +DP  L +  +    C+VN+GLP+     ++F Y+   QF  +P+S    C
Subjt:  EWNTTVSNNC-LCSQSEVKLDCRGFQTTKSIDPLILAITDT---ECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC

AT4G24972.1 tapetum determinant 11.7e-0529.07Show/hide
Query:  QCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCL--CSQSEVKLDCRGFQTTKSIDPLIL-AITDTECLVNNGLPIFNSTPITFTYA
        +C  ++I + Q++T    +G+  +   ++N C+  C  S + ++C  F + K I+P +   I   +CLVNNG P+   + ++F YA
Subjt:  QCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCL--CSQSEVKLDCRGFQTTKSIDPLIL-AITDTECLVNNGLPIFNSTPITFTYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGG
ATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCA
TCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTC
AACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGG
ATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCA
TCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTC
AACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA
Protein sequenceShow/hide protein sequence
MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQF
NFKPISSQIACS