; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G005290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G005290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NEN4-like
Genome locationCmo_Chr07:2408211..2409708
RNA-Seq ExpressionCmoCh07G005290
SyntenyCmoCh07G005290
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594865.1 Protein NEN4, partial [Cucurbita argyrosperma subsp. sororia]2.0e-14997.86Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSF+EGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAF EIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSIL+GK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

KAG7026830.1 Protein NEN4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-15098.22Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAF EIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSIL+GK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

XP_022962945.1 protein NEN4-like [Cucurbita moschata]1.4e-15098.93Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQGK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

XP_023004028.1 protein NEN4 [Cucurbita maxima]4.2e-14796.8Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVEL+SFTTLIRPTDLSAVAARSSR DGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAFAEIG+PAP PVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQGK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQ RSVPYATRERLGIAKMTAKVKNVVC AQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

XP_023518830.1 protein NEN4-like [Cucurbita pepo subsp. pepo]9.1e-15098.22Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVEL+SFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEV+DKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQGK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

TrEMBL top hitse value%identityAlignment
A0A5D3CL58 Protein NEN4 isoform X31.6e-13188.97Show/hide
Query:  MEASSSFKEGA-EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI
        MEAS SFKEGA EIVFFDLETTVP RVGQRFRVLEFGAIVVCP+KLVEL+SF TLI+PTDLSAVA RSSR DGITRE VATAPLFE+VADKIFSILNGRI
Subjt:  MEASSSFKEGA-EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI

Query:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG
        WAGHNI+RFDCVRI+EAFAEIGRPAP PVGMVDSLGVLT KFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQ 
Subjt:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG

Query:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL
        KWKTS T TTRNRANGKLHCREE SRKSPPSSPGYQLRSVPY +RERLGI KMTAKVKNV+  AQGKQ  N+LLKHSRSLL
Subjt:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL

A0A6J1BU43 protein NEN4 isoform X21.6e-13691.81Show/hide
Query:  MEASSSFKEG-AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI
        MEASSS K+G AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVEL+SFTTLIRPTDLSAV +RSSRRDGITRE VATAPLFEEVADKIFSILNGRI
Subjt:  MEASSSFKEG-AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI

Query:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG
        WAGHNIQRFDCVRIREAFAEIGRPAP PVGMVDSLGVLT KFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSIL G
Subjt:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG

Query:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL
        KWKTSST TTRNRANGKLHCREE SRKSPP+SPGYQLRSVPYA RERLGI KMT KVKNV+CRAQGKQ F+ILL+HSRSLL
Subjt:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL

A0A6J1BUQ8 protein NEN4 isoform X18.9e-13590.53Show/hide
Query:  MEASSSFKEG-AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI
        MEASSS K+G AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVEL+SFTTLIRPTDLSAV +RSSRRDGITRE VATAPLFEEVADKIFSILNGRI
Subjt:  MEASSSFKEG-AEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRI

Query:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG
        WAGHNIQRFDCVRIREAFAEIGRPAP PVGMVDSLGVLT KFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSIL G
Subjt:  WAGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQG

Query:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAK----MTAKVKNVVCRAQGKQPFNILLKHSRSLL
        KWKTSST TTRNRANGKLHCREE SRKSPP+SPGYQLRSVPYA RERLGI K    MT KVKNV+CRAQGKQ F+ILL+HSRSLL
Subjt:  KWKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAK----MTAKVKNVVCRAQGKQPFNILLKHSRSLL

A0A6J1HGK3 protein NEN4-like6.8e-15198.93Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQGK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

A0A6J1KYA7 protein NEN42.0e-14796.8Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVEL+SFTTLIRPTDLSAVAARSSR DGITREIVATAPLFEEVADKIFSILNGRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNIQRFDCVRIREAFAEIG+PAP PVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLF   LESTLPSILQGK
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH
        WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQ RSVPYATRERLGIAKMTAKVKNVVC AQGKQPFNILLKHSRSLLH
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH

SwissProt top hitse value%identityAlignment
F4JJ23 Protein NEN43.5e-8863.84Show/hide
Query:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV
        EIVFFDLET VPN+ GQ F +LEFGAI+VCP KL EL+SFTTLI+P DLS V+ RSSR DGITR  V  AP FE+VA+KI  +LNGRIWAGHNI+RFDCV
Subjt:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV

Query:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTITTRN
        RI+EAFAEIG+ AP P G++DSLG+L+ KFGKRAGNMKMASLA+YF LG QKHRSLDDVRMNLEVLKHCATVLF   LESTLP+ L+GKW TSS I TR+
Subjt:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTITTRN

Query:  RANGKLHCREEGSRKSPPSSPGYQL--RSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL
        R N                   YQ+  R++PY+   +  + KMT  VKN++ +AQG Q    L+ HS SLL
Subjt:  RANGKLHCREEGSRKSPPSSPGYQL--RSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL

Q0V842 Protein NEN21.0e-6356.44Show/hide
Query:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR
        ++ +EI FFD+ETT+P RVGQ + +LEFG+I+VCP KLVEL +++ L+RP +L+ +  RS + +GI RE V +A  F ++AD ++ IL+GRIWAGHNI +
Subjt:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR

Query:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI
        FDC RIREAFAEIGR  P P G +DSL +LTQ+FG+RAG+MKMA+LA+YF LG Q HRSLDDVRMN EVLK+CATVLF   LES+LP  L     T++T 
Subjt:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI

Query:  TTRNRANGKLHCREEGSRKSPPSSP
         T +R       R    +KSP  SP
Subjt:  TTRNRANGKLHCREEGSRKSPPSSP

Q8RA32 DNA polymerase III PolC-type4.7e-0827.78Show/hide
Query:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV
        E V FD+ETT  + +     ++E GA+ +   K+V  D+F T + P     +++  ++  GI   +V  APL EEV  K      G +   HN   FD  
Subjt:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV

Query:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLG-QQKHRSLDDVRMNLEVLKHCATVLFLVMLE
         I+    ++G      V  +D+L  L++   +   N K+ +LA +F++     HR+++D +   E+        F+ MLE
Subjt:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLG-QQKHRSLDDVRMNLEVLKHCATVLFLVMLE

Q9CA74 Protein NEN32.4e-6860.17Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        M +S    E +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS ++  + RR GITR+ V +A  F E+ADK++ IL+GRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNI RFDCVRIREAFAEIG   P P   +DSL +L+QKFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLEV+K+CATVLF   LES++P IL   
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS
           S   + R R+NGKL     G R+S  SS
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS

Q9FLR0 Protein NEN17.6e-6763.41Show/hide
Query:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR
        ++ +EI FFD+ETTVP R GQRF +LEFG+I+VCP KL EL S+TTL++P DLS +++ S R +GI R+ V  APLF ++AD ++ IL+GRIWAGHNI R
Subjt:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR

Query:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI
        FDC RIREAFAEIGR  P P G +DSLG+LTQKFG+RAG+MKMA+LA YF LG Q HRSLDDVRMNLEVLK+CATVLF   LES+LP        +  TI
Subjt:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI

Query:  TTRNR
        ++R R
Subjt:  TTRNR

Arabidopsis top hitse value%identityAlignment
AT1G74390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-6960.17Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        M +S    E +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS ++  + RR GITR+ V +A  F E+ADK++ IL+GRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNI RFDCVRIREAFAEIG   P P   +DSL +L+QKFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLEV+K+CATVLF   LES++P IL   
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS
           S   + R R+NGKL     G R+S  SS
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS

AT1G74390.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-6256.28Show/hide
Query:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW
        M +S    E +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS ++  + RR GITR+ V +A  F E+ADK++ IL+GRIW
Subjt:  MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIW

Query:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK
        AGHNI RFDCVRIREAFAEIG   P P   +DSL +L+QKFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLE              ES++P IL   
Subjt:  AGHNIQRFDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGK

Query:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS
           S   + R R+NGKL     G R+S  SS
Subjt:  WKTSSTITTRNRANGKLHCREEGSRKSPPSS

AT4G39810.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-8963.84Show/hide
Query:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV
        EIVFFDLET VPN+ GQ F +LEFGAI+VCP KL EL+SFTTLI+P DLS V+ RSSR DGITR  V  AP FE+VA+KI  +LNGRIWAGHNI+RFDCV
Subjt:  EIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDCV

Query:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTITTRN
        RI+EAFAEIG+ AP P G++DSLG+L+ KFGKRAGNMKMASLA+YF LG QKHRSLDDVRMNLEVLKHCATVLF   LESTLP+ L+GKW TSS I TR+
Subjt:  RIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTITTRN

Query:  RANGKLHCREEGSRKSPPSSPGYQL--RSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL
        R N                   YQ+  R++PY+   +  + KMT  VKN++ +AQG Q    L+ HS SLL
Subjt:  RANGKLHCREEGSRKSPPSSPGYQL--RSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLL

AT5G07710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-6863.41Show/hide
Query:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR
        ++ +EI FFD+ETTVP R GQRF +LEFG+I+VCP KL EL S+TTL++P DLS +++ S R +GI R+ V  APLF ++AD ++ IL+GRIWAGHNI R
Subjt:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR

Query:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI
        FDC RIREAFAEIGR  P P G +DSLG+LTQKFG+RAG+MKMA+LA YF LG Q HRSLDDVRMNLEVLK+CATVLF   LES+LP        +  TI
Subjt:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI

Query:  TTRNR
        ++R R
Subjt:  TTRNR

AT5G61390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-6556.44Show/hide
Query:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR
        ++ +EI FFD+ETT+P RVGQ + +LEFG+I+VCP KLVEL +++ L+RP +L+ +  RS + +GI RE V +A  F ++AD ++ IL+GRIWAGHNI +
Subjt:  KEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQR

Query:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI
        FDC RIREAFAEIGR  P P G +DSL +LTQ+FG+RAG+MKMA+LA+YF LG Q HRSLDDVRMN EVLK+CATVLF   LES+LP  L     T++T 
Subjt:  FDCVRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTI

Query:  TTRNRANGKLHCREEGSRKSPPSSP
         T +R       R    +KSP  SP
Subjt:  TTRNRANGKLHCREEGSRKSPPSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTTCAAGTTCATTCAAGGAAGGTGCAGAGATCGTCTTCTTTGACTTGGAAACAACAGTGCCGAACAGAGTTGGGCAGCGGTTTCGAGTATTGGAATTTGGTGC
TATTGTTGTCTGCCCCCTGAAACTTGTGGAGCTTGATAGCTTTACCACCCTCATCAGGCCAACAGATTTATCAGCTGTTGCGGCAAGGTCCAGCCGACGTGACGGGATAA
CAAGAGAAATTGTTGCGACTGCGCCGTTGTTTGAGGAAGTTGCAGACAAGATATTCAGCATCTTGAATGGAAGGATATGGGCAGGTCATAACATTCAAAGATTCGACTGT
GTTCGTATTAGGGAGGCGTTTGCGGAGATCGGCAGGCCTGCTCCTATGCCAGTTGGGATGGTTGATTCTTTGGGAGTCTTAACTCAGAAGTTCGGCAAGAGAGCTGGAAA
CATGAAGATGGCATCATTGGCTTCTTACTTTCAGCTGGGGCAGCAAAAGCACAGGAGCCTTGATGATGTTCGTATGAACTTGGAGGTTCTCAAGCATTGTGCGACGGTAC
TATTTCTGGTAATGCTCGAATCGACCCTCCCAAGCATATTGCAGGGGAAGTGGAAGACTTCATCCACCATAACAACCCGAAACAGAGCCAATGGGAAGCTGCATTGCAGA
GAAGAAGGTAGTCGAAAATCTCCTCCCTCGTCGCCAGGATATCAACTGAGATCAGTTCCTTATGCAACAAGGGAAAGATTGGGAATTGCAAAGATGACAGCAAAGGTAAA
GAATGTAGTCTGCAGAGCTCAGGGAAAACAGCCCTTTAACATCTTACTCAAACATTCTCGATCGCTACTACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTTCAAGTTCATTCAAGGAAGGTGCAGAGATCGTCTTCTTTGACTTGGAAACAACAGTGCCGAACAGAGTTGGGCAGCGGTTTCGAGTATTGGAATTTGGTGC
TATTGTTGTCTGCCCCCTGAAACTTGTGGAGCTTGATAGCTTTACCACCCTCATCAGGCCAACAGATTTATCAGCTGTTGCGGCAAGGTCCAGCCGACGTGACGGGATAA
CAAGAGAAATTGTTGCGACTGCGCCGTTGTTTGAGGAAGTTGCAGACAAGATATTCAGCATCTTGAATGGAAGGATATGGGCAGGTCATAACATTCAAAGATTCGACTGT
GTTCGTATTAGGGAGGCGTTTGCGGAGATCGGCAGGCCTGCTCCTATGCCAGTTGGGATGGTTGATTCTTTGGGAGTCTTAACTCAGAAGTTCGGCAAGAGAGCTGGAAA
CATGAAGATGGCATCATTGGCTTCTTACTTTCAGCTGGGGCAGCAAAAGCACAGGAGCCTTGATGATGTTCGTATGAACTTGGAGGTTCTCAAGCATTGTGCGACGGTAC
TATTTCTGGTAATGCTCGAATCGACCCTCCCAAGCATATTGCAGGGGAAGTGGAAGACTTCATCCACCATAACAACCCGAAACAGAGCCAATGGGAAGCTGCATTGCAGA
GAAGAAGGTAGTCGAAAATCTCCTCCCTCGTCGCCAGGATATCAACTGAGATCAGTTCCTTATGCAACAAGGGAAAGATTGGGAATTGCAAAGATGACAGCAAAGGTAAA
GAATGTAGTCTGCAGAGCTCAGGGAAAACAGCCCTTTAACATCTTACTCAAACATTCTCGATCGCTACTACACTGACTCGAAACCAAACGCCCAATGTTTGTCACTTTCC
ATACTTCGTGACTGCAACACACTTCTGTTAACCCTTTAGGAGGCATCCGCCCCCACATATTCGTCAGCCCGACACAAGAAGCTTTCAGGCGAAAAAAACTTCCATTTTGA
GACTGCGACACCCGTAAACTCGTTACGCTGTTCTACTGAAGTCGGGGCGGCCTTCCCACGCCAAATTGTTGTTTTATACTACTTTTTAAAGTGTCTGCTTCTATTTTATA
GCATGGGCCCATGGCCAATTTGGGCTTATTTTTACTCTCAAG
Protein sequenceShow/hide protein sequence
MEASSSFKEGAEIVFFDLETTVPNRVGQRFRVLEFGAIVVCPLKLVELDSFTTLIRPTDLSAVAARSSRRDGITREIVATAPLFEEVADKIFSILNGRIWAGHNIQRFDC
VRIREAFAEIGRPAPMPVGMVDSLGVLTQKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLVMLESTLPSILQGKWKTSSTITTRNRANGKLHCR
EEGSRKSPPSSPGYQLRSVPYATRERLGIAKMTAKVKNVVCRAQGKQPFNILLKHSRSLLH