; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G005560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G005560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationCmo_Chr07:2499286..2503225
RNA-Seq ExpressionCmoCh07G005560
SyntenyCmoCh07G005560
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]9.4e-10889.79Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

KAG7026854.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-10789.36Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDM AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

XP_022962974.1 polyadenylate-binding protein 3-like [Cucurbita moschata]9.4e-10889.79Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

XP_023003098.1 polyadenylate-binding protein 3-like [Cucurbita maxima]6.7e-10688.09Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDM+AADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GA VSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]2.6e-10285.17Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein8.3e-10283.9Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        M+EEEHEVYGGEIPVEEGD+DM+A DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like2.2e-10284.75Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X11.7e-10285.11Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGK PR+RR M+YMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like4.5e-10889.79Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like3.3e-10688.09Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL
        MDEEEHEVYGGEIPVEEGDVDM+AADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GA VSQESKEETDSRSVFVGN           
Subjt:  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNL

Query:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM
Subjt:  CFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYM

Query:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
        GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY
Subjt:  GYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 27.6e-2845.45Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTP
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  D++SV+VGN                        VDY+ TP
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTP

Query:  EEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY
        EE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E   V  ALLLN S LH R LKV  KRTN+PGM +   +     R     GYR R     PY
Subjt:  EEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY

Q93VI4 Polyadenylate-binding protein 12.4e-6659.36Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G V + E KEE DSR
Subjt:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR

Query:  SVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRT
        S++VGN                        VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRT
Subjt:  SVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRT

Query:  NIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        N+PGM+Q F  R  P+   R   P VP  FY PY YG+ PR+RRPMRY PY
Subjt:  NIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

Q9DDY9 Polyadenylate-binding protein 2-A1.7e-2740.91Show/hide
Query:  DEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA---VVSQESKEETDSRSVFVGNGIVAAGNDG
        DEE  E   GE+       D T  D     EL+ +K R++EMEEEA  L+E+Q +VEK+M     P  A   ++S E K E D+RS++VGN         
Subjt:  DEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA---VVSQESKEETDSRSVFVGNGIVAAGNDG

Query:  NLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMK---QYFPQ
                       VDY  T EE++ HF  CG+VNRVTIL DKF G PKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+    + FP+
Subjt:  NLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMK---QYFPQ

Query:  -RYNP-YMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
         RY      Y SR  +   Y   P G     R R    Y PY
Subjt:  -RYNP-YMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 25.2e-8570.08Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNG
        M+EEEHEVYGGEIP              D+DM AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA    +Q  KEE D+RSVFVGN 
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNG

Query:  IVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQ
                               VDYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ
Subjt:  IVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQ

Query:  YFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        +  +R+NPYMGYR RRP++ PY YSPYGYGK PR+RRPMRYMPY
Subjt:  YFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 31.1e-8771.67Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGN     
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA

Query:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ
                           VDYACTPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P 
Subjt:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ

Query:  RYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        R+NP MGYR RRP+VPPYFYSPYGYGK PR+RRPMRYMPY
Subjt:  RYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.0e-8971.67Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGN     
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA

Query:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ
                           VDYACTPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P 
Subjt:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ

Query:  RYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        R+NP MGYR RRP+VPPYFYSPYGYGK PR+RRPMRYMPY
Subjt:  RYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-8170.8Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGN     
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAA

Query:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ
                           VDYACTPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P 
Subjt:  GNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ

Query:  RYNPYMGYRSRRPYVPPYFYSPYGYG
        R+NP MGYR RRP+VPPYFYSPYGYG
Subjt:  RYNPYMGYRSRRPYVPPYFYSPYGYG

AT5G51120.1 polyadenylate-binding protein 11.7e-6759.36Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G V + E KEE DSR
Subjt:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR

Query:  SVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRT
        S++VGN                        VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRT
Subjt:  SVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRT

Query:  NIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        N+PGM+Q F  R  P+   R   P VP  FY PY YG+ PR+RRPMRY PY
Subjt:  NIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 12.7e-6050.69Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  DEEEHEVYGGEIP-VEEGDVDM-----------TAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP
                           +   + VS   KEE DSRS++VGN                        VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP
Subjt:  -------------------DPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP

Query:  KGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        KGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P VP  FY PY YG+ PR+RRPMRY PY
Subjt:  KGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-8670.08Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNG
        M+EEEHEVYGGEIP              D+DM AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA    +Q  KEE D+RSVFVGN 
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNG

Query:  IVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQ
                               VDYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ
Subjt:  IVAAGNDGNLCFRNEGYLTVLARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQ

Query:  YFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        +  +R+NPYMGYR RRP++ PY YSPYGYGK PR+RRPMRYMPY
Subjt:  YFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAGGAGCACGAGGTTTACGGTGGAGAGATCCCGGTCGAAGAGGGTGATGTTGACATGACTGCCGCCGATGACGACGCCATCAAGGAGCTAGACGAGATGAA
GAAGCGACTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAGATGCAGGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCCGGTGCGGTTGTAAGTC
AAGAAAGCAAGGAGGAGACAGATTCGCGATCCGTGTTTGTTGGCAACGGCATTGTTGCTGCTGGGAATGATGGTAACTTATGCTTCAGAAATGAGGGCTATTTAACTGTC
CTTGCGAGGGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACCATTCTTACAGATAAATTTGGTCAACCCAA
GGGCTTCGCTTATGTGGAGTTCCTTGAAGCCGAGGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTA
ATATTCCTGGGATGAAGCAGTATTTCCCTCAGCGTTACAATCCCTACATGGGTTATCGATCCAGGAGGCCATATGTACCCCCGTATTTCTACTCACCATATGGATATGGG
AAGACTCCCCGTTACCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
GGTTGATTACCCTATATCTTATATAACTCATTCCACCTGTTCAGGCGAAGGCTGTGATAGGTACACTACACGAGGAAGGACGGAGATGGATGAAGAGGAGCACGAGGTTT
ACGGTGGAGAGATCCCGGTCGAAGAGGGTGATGTTGACATGACTGCCGCCGATGACGACGCCATCAAGGAGCTAGACGAGATGAAGAAGCGACTGAAGGAGATGGAGGAG
GAAGCAGCTGCTCTTCGCGAGATGCAGGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCCGGTGCGGTTGTAAGTCAAGAAAGCAAGGAGGAGACAGATTC
GCGATCCGTGTTTGTTGGCAACGGCATTGTTGCTGCTGGGAATGATGGTAACTTATGCTTCAGAAATGAGGGCTATTTAACTGTCCTTGCGAGGGTTGATTATGCATGTA
CACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACCATTCTTACAGATAAATTTGGTCAACCCAAGGGCTTCGCTTATGTGGAGTTCCTT
GAAGCCGAGGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTAATATTCCTGGGATGAAGCAGTATTT
CCCTCAGCGTTACAATCCCTACATGGGTTATCGATCCAGGAGGCCATATGTACCCCCGTATTTCTACTCACCATATGGATATGGGAAGACTCCCCGTTACCGAAGGCCCA
TGCGATACATGCCATACTACTAGGAGGGCATTGCCCATAACTAGACTGCCATATGAATCTATATTTATGACTTCACTTCGATTTAGAGCCTATAGAACTATGGACTTGAT
TATCTTTAGCCATTCGATGTCGAATTATATCAATGATCTAATGTATGATATACGGTAATATCCAAACTTTTTGTATGATGATTTGGCTGTGATATCCAAACTTTTTAGCA
ACTAACTCTTTAGCTTTTCCGTAGAGTAGATTTTCTGGAATTTCTACTTTTTAGCAAC
Protein sequenceShow/hide protein sequence
MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNGIVAAGNDGNLCFRNEGYLTV
LARVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYG
KTPRYRRPMRYMPYY