; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G006400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G006400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr07:2894381..2894785
RNA-Seq ExpressionCmoCh07G006400
SyntenyCmoCh07G006400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]8.1e-7299.25Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGKLVAKKS
        MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR EEDPFLEAYKECTKSVKKGKLVAKKS
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGKLVAKKS

Query:  KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK
        KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK
Subjt:  KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK

KAG6604109.1 hypothetical protein SDJN03_04718, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1754.21Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD-----VQPLPLHSVHE-DSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGK
        M+H+K+ S+ N+PFSWE+ P  S K  F+D     +QP P  + H  DSEFD V KI PPPP R QP S+RNAS K    E+DPFL AYKECTKSVK G 
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD-----VQPLPLHSVHE-DSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGK

Query:  LVAKKSK
         V + +K
Subjt:  LVAKKSK

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]1.1e-1746.98Show/hide
Query:  HKKLYSKGN-VPFSWEEKPGISKKICFQDVQPLPLH----SVHED----SEFDD-VGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKK
        H+KL S+GN +P   +  PG+SK   F+D Q L LH    S++++    S+FD  V    PPPPCR+ P      S K     +DPFL AYKECTKSVK 
Subjt:  HKKLYSKGN-VPFSWEEKPGISKKICFQDVQPLPLH----SVHED----SEFDD-VGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKK

Query:  GKL-----VAKKSK-LFG-FLCKSFDSCEIRDASVFKLGRDSIRVLSWK
          +     V KKSK LFG F CK+  SC+I D S FKL RD+I V +WK
Subjt:  GKL-----VAKKSK-LFG-FLCKSFDSCEIRDASVFKLGRDSIRVLSWK

OMO56427.1 hypothetical protein CCACVL1_26561 [Corchorus capsularis]1.5e-1741.29Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE+      S   D G          K+PPPPPC +Q    R+ S KG R  +EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  +SC++RD ++ +L
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

OMP01746.1 hypothetical protein COLO4_11612 [Corchorus olitorius]3.0e-1841.94Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE       S   D G          K+PPPPPC +QP   R+ S KG R  +EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  ++C++RD ++ KL
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

TrEMBL top hitse value%identityAlignment
A0A1R3GEE0 Uncharacterized protein7.2e-1841.29Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE+      S   D G          K+PPPPPC +Q    R+ S KG R  +EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  +SC++RD ++ +L
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

A0A1R3K3U4 Uncharacterized protein1.5e-1841.94Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE       S   D G          K+PPPPPC +QP   R+ S KG R  +EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  ++C++RD ++ KL
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

A0A2P5FS81 Uncharacterized protein2.1e-1743.17Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGK
        MSH+K+YS+G++PFSWE+KPGISK     +      V+ L L S            I P PPC +     R++STKG + +EDPFL AYKECTK +KKGK
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGK

Query:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL
                     KKS    F CKS  +CE++D +  KL
Subjt:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL

A0A7J8S2N4 Uncharacterized protein3.6e-1747.01Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEAYKECTKSVKKG
        MSH K++S GNVPFSWEEKPG+SK  K+   D Q  P+ S    VH+        K+PPPPP   QP   R+AS KG R   +DPFL AYKECTKS    
Subjt:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEAYKECTKSVKKG

Query:  KLVAKKS----------KLFGFLCKSFDSCEIRD
        KL +  S          K   F CK  DS ++RD
Subjt:  KLVAKKS----------KLFGFLCKSFDSCEIRD

A0A7J9EGH2 Uncharacterized protein (Fragment)3.6e-1746.62Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEAYKECTKSVKKG
        MSH K++S GN+PFSWEEKPG+SK  K+   D Q  P+ S    VH+        K+PPPPP   QP   R+AS KG R   +DPFL AYKECTKS    
Subjt:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-CEEDPFLEAYKECTKSVKKG

Query:  KLVAKKS---------KLFGFLCKSFDSCEIRD
        KL +  S         K   F CK  DS ++RD
Subjt:  KLVAKKS---------KLFGFLCKSFDSCEIRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAAAAAACTGTATTCTAAAGGAAACGTTCCCTTTTCATGGGAGGAAAAGCCTGGGATTTCCAAGAAAATCTGCTTCCAAGATGTTCAACCTCTGCCCTTACA
CTCTGTTCATGAAGATTCTGAATTTGATGACGTTGGTAAGATTCCTCCGCCGCCGCCGTGCCGGGTGCAGCCATGCTCTCTTAGAAACGCCTCCACCAAGGGAAGCCGGT
GCGAGGAGGACCCTTTTCTTGAGGCGTATAAGGAGTGTACTAAGAGTGTAAAAAAAGGGAAACTTGTGGCGAAGAAGAGTAAGTTGTTTGGGTTTCTTTGTAAGAGCTTT
GATTCTTGTGAAATTAGAGATGCGAGTGTGTTCAAGCTTGGTCGAGATAGCATTCGTGTGCTTAGTTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCACAAAAAACTGTATTCTAAAGGAAACGTTCCCTTTTCATGGGAGGAAAAGCCTGGGATTTCCAAGAAAATCTGCTTCCAAGATGTTCAACCTCTGCCCTTACA
CTCTGTTCATGAAGATTCTGAATTTGATGACGTTGGTAAGATTCCTCCGCCGCCGCCGTGCCGGGTGCAGCCATGCTCTCTTAGAAACGCCTCCACCAAGGGAAGCCGGT
GCGAGGAGGACCCTTTTCTTGAGGCGTATAAGGAGTGTACTAAGAGTGTAAAAAAAGGGAAACTTGTGGCGAAGAAGAGTAAGTTGTTTGGGTTTCTTTGTAAGAGCTTT
GATTCTTGTGAAATTAGAGATGCGAGTGTGTTCAAGCTTGGTCGAGATAGCATTCGTGTGCTTAGTTGGAAGTAG
Protein sequenceShow/hide protein sequence
MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRCEEDPFLEAYKECTKSVKKGKLVAKKSKLFGFLCKSF
DSCEIRDASVFKLGRDSIRVLSWK