CuGenDBv2

Gene ID	CmoCh07G006690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	LOB domain-containing protein
Genome location	Cmo_Chr07:3018288..3020079
RNA-Seq Expression	CmoCh07G006690
Synteny	CmoCh07G006690
Gene Ontology terms	GO:0010468 - regulation of gene expression (biological process)
InterPro domains	IPR004883 - Lateral organ boundaries, LOB

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036429.1 LOB domain-containing protein 37-like [Cucumis melo var. makuwa]

9.3e-116

90.21

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK+QLNDLDLRLTP FPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH +++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

KAG6594987.1 LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-129

98.29

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHHR+YHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

XP_022963426.1 LOB domain-containing protein 37-like [Cucurbita moschata]

1.6e-131

100

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

XP_023003010.1 LOB domain-containing protein 37-like [Cucurbita maxima]

3.9e-130

98.72

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGLVDHHH +YHPEELVPERK+LNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

XP_023517275.1 LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo]

7.8e-131

99.15

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHHR+YHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJN9 LOB domain-containing protein

5.0e-115

90.64

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EV CTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK+QLNDLDLRLTP FPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH +Y PEE V +RKLLNLFV
Subjt:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

A0A5A7T4Z4 LOB domain-containing protein 37-like

4.5e-116

90.21

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK+QLNDLDLRLTP FPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH +++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

A0A5D3CP44 LOB domain-containing protein 37-like

1.9e-114

90.21

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK+QLNDLDLRLTP FPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH  ++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

A0A6J1HG39 LOB domain-containing protein 37-like

7.7e-132

100

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

A0A6J1KQK8 LOB domain-containing protein 37-like

1.9e-130

98.72

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
        TTTCFESGGLVDHHH +YHPEELVPERK+LNLFV
Subjt:  TTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

SwissProt top hits

e value

%identity

Alignment

Q9FN11 LOB domain-containing protein 37

1.3e-72

64.6

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI+T++AQGHATVFVAKFFGRAGLMSFISAVP+SQRP+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNQLNDLDLRLTPNFPA
        VLRGG+LRP+ E L      AG P+P S+E SE    CT+M  L       R+ Y +SRFS+SRSR      SP +++   S     ++LDL L PNFP 
Subjt:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNQLNDLDLRLTPNFPA

Query:  K------STRRAATPSMNSEESETTT
        K      + RR+ TPSMNSE+S TTT
Subjt:  K------STRRAATPSMNSEESETTT

Q9M886 LOB domain-containing protein 41

3.6e-38

46.7

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE C +RPCL WI + EAQ +ATVF+AKF+GRAGLM+ I+A P   RP +F+SLL EACGR VNP+ G+VGLLW+GNW +CQ AVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLN
        V++G  ++ +    A     P             D ++ A    TD+ KL  +    R S    +   + K  E S  + L+
Subjt:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLN

Q9SN23 LOB domain-containing protein 38

8.0e-70

61.8

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI++ EAQGHATVFVAKFFGRAGLMSFISAVPESQ P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNQLNDLDLRLTPNFPAK
        VLRGG+L+P+ E L     AG P+P SDE SE    CT+M  LR +        Y + RFS+SRSR     SP +++   S +   ++LDL L P +P K
Subjt:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNQLNDLDLRLTPNFPAK

Query:  STR-RAATPSMNSEESETTTCFESGGLVDHHHR
        +   +  TPSM SEES TT  F++    D + R
Subjt:  STR-RAATPSMNSEESETTTCFESGGLVDHHHR

Q9SZE8 LOB domain-containing protein 39

1.9e-63

55.16

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPCLQWI+++E+QGHATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRL------------TPNFPAKS
        VLRGGTLRP+++ L + S   + DE+SE       +W     R+   + RFS SRS    K            +DLDL++             P  P  S
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRL------------TPNFPAKS

Query:  ---TRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
             +   P   SEES TT+C+E+G   D+  +         E+KLLNLFV
Subjt:  ---TRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

Q9ZW96 LOB domain-containing protein 40

6.4e-43

66.36

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+C +RPCLQWI ++E+Q +ATVF+AKF+GRAGLM+ ++  P+  RP++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPM
        V+RG  + P+
Subjt:  VLRGGTLRPM

Arabidopsis top hits

e value

%identity

Alignment

AT1G67100.1 LOB domain-containing protein 40

4.6e-44

66.36

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+C +RPCLQWI ++E+Q +ATVF+AKF+GRAGLM+ ++  P+  RP++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPM
        V+RG  + P+
Subjt:  VLRGGTLRPM

AT3G02550.1 LOB domain-containing protein 41

2.6e-39

46.7

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE C +RPCL WI + EAQ +ATVF+AKF+GRAGLM+ I+A P   RP +F+SLL EACGR VNP+ G+VGLLW+GNW +CQ AVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLN
        V++G  ++ +    A     P             D ++ A    TD+ KL  +    R S    +   + K  E S  + L+
Subjt:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLN

AT3G49940.1 LOB domain-containing protein 38

5.7e-71

61.8

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI++ EAQGHATVFVAKFFGRAGLMSFISAVPESQ P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNQLNDLDLRLTPNFPAK
        VLRGG+L+P+ E L     AG P+P SDE SE    CT+M  LR +        Y + RFS+SRSR     SP +++   S +   ++LDL L P +P K
Subjt:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNQLNDLDLRLTPNFPAK

Query:  STR-RAATPSMNSEESETTTCFESGGLVDHHHR
        +   +  TPSM SEES TT  F++    D + R
Subjt:  STR-RAATPSMNSEESETTTCFESGGLVDHHHR

AT4G37540.1 LOB domain-containing protein 39

1.4e-64

55.16

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPCLQWI+++E+QGHATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRL------------TPNFPAKS
        VLRGGTLRP+++ L + S   + DE+SE       +W     R+   + RFS SRS    K            +DLDL++             P  P  S
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRL------------TPNFPAKS

Query:  ---TRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV
             +   P   SEES TT+C+E+G   D+  +         E+KLLNLFV
Subjt:  ---TRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV

AT5G67420.1 LOB domain-containing protein 37

9.4e-74

64.6

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI+T++AQGHATVFVAKFFGRAGLMSFISAVP+SQRP+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNQLNDLDLRLTPNFPA
        VLRGG+LRP+ E L      AG P+P S+E SE    CT+M  L       R+ Y +SRFS+SRSR      SP +++   S     ++LDL L PNFP 
Subjt:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNQLNDLDLRLTPNFPA

Query:  K------STRRAATPSMNSEESETTT
        K      + RR+ TPSMNSE+S TTT
Subjt:  K------STRRAATPSMNSEESETTT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTGCAACGGTTGCCGCGTTCTCCGAAAGGGCTGCAGTGAGTCCTGTATTCTCCGCCCTTGCTTGCAGTGGATTGACACCTCTGAAGCCCAAGGCCACGCTACTGT
CTTTGTCGCTAAGTTCTTCGGCCGCGCCGGTCTTATGTCTTTCATCTCCGCCGTCCCTGAATCTCAACGACCTTCTTTGTTTCAGTCTTTGCTGTTTGAAGCCTGTGGTC
GTACTGTCAATCCGGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGAAACTGGCATATCTGTCAGGCGGCGGTGGAGACTGTGTTACGAGGCGGTACGTTGCGGCCGATG
AATGAGTTTCTCGCCGCTGGATCTCCTAATCCGGCTTCCGATGAAACGTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTTCGAGATTCTTATCCAAATTCTCG
ATTCTCTAACTCCCGATCCAGACTCTCCCCAAAACGTAAACGATCCGAGGAATCCACAAAAAACCAACTAAACGACTTAGATCTCCGTTTAACGCCGAATTTTCCGGCGA
AATCAACCCGGCGTGCCGCTACTCCGTCGATGAATTCCGAGGAATCCGAAACCACTACGTGCTTTGAGAGCGGCGGCTTGGTTGATCATCATCATCGCAACTACCATCCA
GAAGAACTGGTACCGGAACGGAAACTTCTCAATTTATTCGTCTAA

mRNA sequence

Show/hide mRNA sequence

CTCATTTTTCTTTCTTACGCGTTAATGCTATGAACTTTGTGCGTGATTTTCGTGTTTATGGTAGTGTTACGCACTCGATTTTCATTTAAAATATTAGAAGAATATAATTA
TATATTTTGTTTTATAAGCCTTCTTATTGGGAGAAAGATGCTCTAAAATATAATAGTTTAAGAAAGCTGCCTCGTCCATTTGGTATTGACCTAATTTGTCGGGAAAAGAA
GTCGGCGTTGGCCATGCTCTTCGTCCGCAATAACAATAAACAAATACAAAAATAGCTTCGGGGATCCAACGGTGGAGGAGCCACCATCCGCGGAGACACGGAGCCGCTAG
CACCCAACTCTTTGGAATCTCATCCTCCCTATGTCCACGCGCTCCTCGGCTCTCATTTTCTGCTAACACTAACCTAAACCTAATTAACCTTAACTTAACCACAGTTAAAT
CAATTCCTCTGCTTCCGGCTCTTATAAATTCCCCCCTCTATCCGTCTTCCTCCGATTGCTCCCTCACCCATACCCTCTTCTCCCCTCATTTCCATGCGAACCACCATCTC
CATTGCACCATCTTCCTCCCAAACATGAGCTGCAACGGTTGCCGCGTTCTCCGAAAGGGCTGCAGTGAGTCCTGTATTCTCCGCCCTTGCTTGCAGTGGATTGACACCTC
TGAAGCCCAAGGCCACGCTACTGTCTTTGTCGCTAAGTTCTTCGGCCGCGCCGGTCTTATGTCTTTCATCTCCGCCGTCCCTGAATCTCAACGACCTTCTTTGTTTCAGT
CTTTGCTGTTTGAAGCCTGTGGTCGTACTGTCAATCCGGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGAAACTGGCATATCTGTCAGGCGGCGGTGGAGACTGTGTTA
CGAGGCGGTACGTTGCGGCCGATGAATGAGTTTCTCGCCGCTGGATCTCCTAATCCGGCTTCCGATGAAACGTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCT
TCGAGATTCTTATCCAAATTCTCGATTCTCTAACTCCCGATCCAGACTCTCCCCAAAACGTAAACGATCCGAGGAATCCACAAAAAACCAACTAAACGACTTAGATCTCC
GTTTAACGCCGAATTTTCCGGCGAAATCAACCCGGCGTGCCGCTACTCCGTCGATGAATTCCGAGGAATCCGAAACCACTACGTGCTTTGAGAGCGGCGGCTTGGTTGAT
CATCATCATCGCAACTACCATCCAGAAGAACTGGTACCGGAACGGAAACTTCTCAATTTATTCGTCTAAAAACCAGATTATTCCGAACGCACGCATGGCTTATATGATTC
TGTGAATCAGACGTTCACAACTGCTATGGTTTAGGCGAATTTTGAAATTCTTTTCCGGGTTGAAAAAAAGTAACCCGGAAGTGAAGTGTCCTGGATTGTGTCGGAAAATT
GAAGATTCCGGCGAGTTTTGTTTTGTTTATGTCGTTTTTGCTTTAAAATTGTAATATCCAGCATCAACCCACCGGCACAGGATTTCACTCCTCGGCCGCCAGAGGAGTGA
GAAATGAGCGTCTGTCGGTGGTCCCTTTTCTTGCCTTGTGTTTCCATTTTGTAATTTACTTATAATAATAATAATTATAAAATCCCAACTTCGTTTCTCTTATCCTTCAT
CCAAATCATGATATATACTTTAGTCGACAACATCGAAGATTCCGG

Protein sequence

Show/hide protein sequence

MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPM
NEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTPNFPAKSTRRAATPSMNSEESETTTCFESGGLVDHHHRNYHP
EELVPERKLLNLFV

CmoCh07G006690 (gene) of Cucurbita moschata (Rifu) v1 genome