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CmoCh07G006780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G006780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLate embryogenesis abundant protein
Genome locationCmo_Chr07:3059050..3059316
RNA-Seq ExpressionCmoCh07G006780
SyntenyCmoCh07G006780
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594997.1 hypothetical protein SDJN03_11550, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3797.73Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQ KRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP

XP_022962656.1 uncharacterized protein LOC111463078 [Cucurbita moschata]2.7e-39100Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]8.8e-3593.26Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSR-RGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKS S+EERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSR  GGGGSTDAPTLSGDA+SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSR-RGGGGSTDAPTLSGDAVSSVINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]6.5e-3897.73Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSR GGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]4.7e-2880.9Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD-AVSSVINRQGVP
        MDKRE DQ +RQQ ERKSG EEER EGIPLE+SPYVNYKDLEDYK+QAYG QGHL+ KP R  GGG TDAPTLSGD A SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD-AVSSVINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein3.0e-2071.6Show/hide
Query:  MDKREADQPKRQQPE-RKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSS
        M+KREADQ + Q  E RKS  E+ER E IPLE+SPYVNY+DLEDYKNQAYG QGHL+ KP R GGGG TDAPTLSGDA ++
Subjt:  MDKREADQPKRQQPE-RKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSS

A0A1S4DTA9 uncharacterized protein LOC1079904492.6e-2474.44Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGS-TDAPTLSGD-AVSSVINRQGVP
        M+KREADQ + Q  ERKS  E+ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+ KP R GGGG  TDAPTLSGD A SSV NRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGS-TDAPTLSGD-AVSSVINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-183.8e-2372.22Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGS-TDAPTLSGD-AVSSVINRQGVP
        M+KR+ADQ + Q  E KS  E+ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+ KP R GGGG  TDAPTLSGD A SSV NRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGS-TDAPTLSGD-AVSSVINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630781.3e-39100Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968244.3e-3593.26Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSR-RGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKS S+EERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSR  GGGGSTDAPTLSGDA+SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSR-RGGGGSTDAPTLSGDAVSSVINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 67.5e-0837.63Show/hide
Query:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD------------AVSSVINRQGVP
        + +++ P  +   +E + + +    +PY++Y +LEDYK + YGAQGH E  P    GGG+TDAPT SG             + +  INRQGVP
Subjt:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD------------AVSSVINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 67.5e-0837.63Show/hide
Query:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD------------AVSSVINRQGVP
        + +++ P  +   +E + + +    +PY++Y +LEDYK + YGAQGH E  P    GGG+TDAPT SG             + +  INRQGVP
Subjt:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGD------------AVSSVINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 61.7e-0746.38Show/hide
Query:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP
        +E+ +   +P + SPY+    LEDYK +AYGA+GH E  P    GGGSTDAPT SGDA ++       P
Subjt:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP

AT2G33690.1 Late embryogenesis abundant protein, group 61.6e-1356.25Show/hide
Query:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVIN
        S+ E  + +PLETSPY  Y+D+EDYK  AYG  GH + KP    GGG+TDAPT SGDA  S I+
Subjt:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGAGGCCGATCAGCCGAAGCGGCAACAACCGGAAAGGAAGAGCGGAAGTGAAGAGGAGAGATTGGAGGGCATTCCGTTGGAGACCAGTCCGTACGTGAA
TTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGAGCCCAAGGCCATCTCGAGTCCAAACCCAGCCGCCGCGGTGGCGGTGGATCCACCGACGCTCCCACTCTCT
CCGGCGACGCCGTTTCGTCGGTGATCAACCGCCAAGGAGTGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCGCGAGGCCGATCAGCCGAAGCGGCAACAACCGGAAAGGAAGAGCGGAAGTGAAGAGGAGAGATTGGAGGGCATTCCGTTGGAGACCAGTCCGTACGTGAA
TTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGAGCCCAAGGCCATCTCGAGTCCAAACCCAGCCGCCGCGGTGGCGGTGGATCCACCGACGCTCCCACTCTCT
CCGGCGACGCCGTTTCGTCGGTGATCAACCGCCAAGGAGTGCCCTGA
Protein sequenceShow/hide protein sequence
MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLESKPSRRGGGGSTDAPTLSGDAVSSVINRQGVP