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CmoCh07G006790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G006790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr07:3062104..3063729
RNA-Seq ExpressionCmoCh07G006790
SyntenyCmoCh07G006790
Gene Ontology termsNA
InterPro domainsIPR027854 - Short transmembrane mitochondrial protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594998.1 hypothetical protein SDJN03_11551, partial [Cucurbita argyrosperma subsp. sororia]7.4e-52100Show/hide
Query:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRSGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKP
        MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRSGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKP
Subjt:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRSGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKP

Query:  KKREDDD
        KKREDDD
Subjt:  KKREDDD

KAG7026954.1 hypothetical protein SDJN02_10962, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-5093.81Show/hide
Query:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVR------SGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
        MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVR      SGERETPMGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
Subjt:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVR------SGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE

Query:  ENYRKPKKREDDD
        ENYRKPKKREDDD
Subjt:  ENYRKPKKREDDD

XP_022963418.1 uncharacterized protein LOC111463630 [Cucurbita moschata]2.1e-22100Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

XP_023518887.1 uncharacterized protein LOC111782272 [Cucurbita pepo subsp. pepo]6.1e-2298.25Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMA+HIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

XP_038882750.1 uncharacterized protein LOC120073907 [Benincasa hispida]1.2e-2091.23Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFI GTVFGIY+AQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

TrEMBL top hitse value%identityAlignment
A0A1S3B1N0 uncharacterized protein LOC1034848242.8e-2089.47Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A5D3CR66 Uncharacterized protein2.8e-2089.47Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1BSM8 uncharacterized protein LOC1110053458.1e-2087.72Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFI GTV GIYVAQNY+VPNIRKLANTG+++AKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1HHR2 uncharacterized protein LOC1114636301.0e-22100Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1KVJ8 uncharacterized protein LOC1114968251.0e-22100Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35736.1 unknown protein2.0e-1875Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK
        MG  RS FSFI G+VFG+Y+AQNY+VPNIRKL NTG+++AKH+EENYRKPKK
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK

AT2G35736.2 unknown protein2.0e-1875Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK
        MG  RS FSFI G+VFG+Y+AQNY+VPNIRKL NTG+++AKH+EENYRKPKK
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK

AT4G25225.1 unknown protein9.1e-1667.27Show/hide
Query:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKRED
        MG IRSSFSFI+GTV GIY+AQ Y+VPNI+KL +  + MAK +EE YRKPK R+D
Subjt:  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKRED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGCGTCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAGCGCGAAGAAACTGAGACTCTCGGAAACGGCGTGGAGGATATATCCATTGAAGAACGGTGTTC
ACTTGCCGCTAATGTACGCTCCGGCGAAAGAGAGACGCCGATGGGCTTTATCAGAAGTAGCTTCTCCTTTATAGTGGGAACGGTATTTGGCATTTACGTGGCTCAAAATT
ACAGTGTTCCCAACATCAGGAAGCTCGCCAATACTGGGATCCTGATGGCCAAACACATCGAAGAGAACTACAGGAAGCCAAAGAAGCGGGAGGACGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGCGTCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAGCGCGAAGAAACTGAGACTCTCGGAAACGGCGTGGAGGATATATCCATTGAAGAACGGTGTTC
ACTTGCCGCTAATGTACGCTCCGGCGAAAGAGAGACGCCGATGGGCTTTATCAGAAGTAGCTTCTCCTTTATAGTGGGAACGGTATTTGGCATTTACGTGGCTCAAAATT
ACAGTGTTCCCAACATCAGGAAGCTCGCCAATACTGGGATCCTGATGGCCAAACACATCGAAGAGAACTACAGGAAGCCAAAGAAGCGGGAGGACGATGATTGA
Protein sequenceShow/hide protein sequence
MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRSGERETPMGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD