; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G006840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G006840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGibberellin regulated protein
Genome locationCmo_Chr07:3085589..3086076
RNA-Seq ExpressionCmoCh07G006840
SyntenyCmoCh07G006840
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026958.1 Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-4698.94Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSGSLSLVLVSLVLSSFLLQHAIADS ATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_022963307.1 peamaclein-like [Cucurbita moschata]6.3e-47100Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_023003134.1 peamaclein-like [Cucurbita maxima]1.7e-4494.68Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSGSLSLVLVSL+LSSFLL HAIADS ATY PSFCDSKCGARCLNAGVKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742788.1 peamaclein-like isoform X2 [Cucumis sativus]2.6e-4087.23Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADS  TYAPS CDSKCG RCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_038880848.1 peamaclein-like [Benincasa hispida]1.5e-4087.23Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S+ LVL+SL+LSSFLLQ+AIADS  TYAPS CDSKCG RCLNAGVKDRCLKYCG+CCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein8.9e-3985.26Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAP-SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADS  TYAP   CDSKCG RCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAP-SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like1.4e-3985.11Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+S +LSSF LQ+  ADS  TYAPS CDSKCG RCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5N6QNF2 Uncharacterized protein3.6e-3270Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAP------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK    +L+L+S++L S  LQ A+AD P   AP      SFCDSKCGARC NAGVKDRCL+YCG+CC QCKCVPSGTYGNKSECPCYRD LNSKGK+KCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAP------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like3.0e-47100Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like8.3e-4594.68Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSGSLSLVLVSL+LSSFLL HAIADS ATY PSFCDSKCGARCLNAGVKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 81.1e-2053.93Show/hide
Query:  LSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        + LV+V   + S LL  +   S  + A S C  KC  RC  AG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  LSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 73.9e-2353.61Show/hide
Query:  SLVLVSLVLSSFLLQHAIADSPATYAP---------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        SL+L+S  L+S  +  A        AP          +C  KC  RC  AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  SLVLVSLVLSSFLLQHAIADSPATYAP---------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein1.6e-2475.41Show/hide
Query:  SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        SFCDSKCG RC  AG ++RCLKYCG+CC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 104.3e-2254.74Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  ++ ++++SL+++S L   + ADS      S C  KC  RC  AG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-13.6e-2965.96Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   L+L+LV+LV++  L+Q  +A S      SFCDSKC  RC  AG+ DRCLKYCG+CC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein3.5e-1953.49Show/hide
Query:  LVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++SL+L+S     + ADS A      C  KC  RC  A    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  LVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein1.3e-1852.33Show/hide
Query:  LVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++SL+L+S     + ADS        C  KC  RC  A    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  LVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein2.7e-2453.61Show/hide
Query:  SLVLVSLVLSSFLLQHAIADSPATYAP---------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        SL+L+S  L+S  +  A        AP          +C  KC  RC  AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  SLVLVSLVLSSFLLQHAIADSPATYAP---------SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein7.5e-2253.93Show/hide
Query:  LSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        + LV+V   + S LL  +   S  + A S C  KC  RC  AG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  LSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein3.0e-2354.74Show/hide
Query:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  ++ ++++SL+++S L   + ADS      S C  KC  RC  AG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCTGGTTCTCTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCCTTCCTCCTCCAACATGCCATTGCTGATTCCCCTGCAACCTATGCTCCAAGTTTTTGTGA
TTCAAAATGTGGGGCAAGATGTTTGAATGCAGGGGTGAAGGACAGGTGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGTAAGTGTGTGCCCTCTGGAACCTATGGAA
ACAAGTCAGAATGTCCTTGCTACAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ACAAAAGGAGAAAGATGAAGTCTGGTTCTCTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCCTTCCTCCTCCAACATGCCATTGCTGATTCCCCTGCAACCTATGCT
CCAAGTTTTTGTGATTCAAAATGTGGGGCAAGATGTTTGAATGCAGGGGTGAAGGACAGGTGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGTAAGTGTGTGCCCTC
TGGAACCTATGGAAACAAGTCAGAATGTCCTTGCTACAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGATTTTATTTTTCATTTAATTTTCCTCCCTTGA
AATCTGTCATGTTTTCACTTTTCAATCACTTGAATAAAATTCCTTTTCC
Protein sequenceShow/hide protein sequence
MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP