; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G007240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G007240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioneukaryotic initiation factor 4A-I isoform X2
Genome locationCmo_Chr07:3266220..3269516
RNA-Seq ExpressionCmoCh07G007240
SyntenyCmoCh07G007240
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595040.1 Eukaryotic initiation factor 4A, partial [Cucurbita argyrosperma subsp. sororia]4.0e-11099.05Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKL+SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

KAG7027063.1 Eukaryotic initiation factor 4A [Cucurbita argyrosperma subsp. argyrosperma]6.4e-10899.03Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKL+SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_022963372.1 eukaryotic initiation factor 4A-I isoform X2 [Cucurbita moschata]8.1e-111100Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_023003701.1 eukaryotic initiation factor 4A-I isoform X2 [Cucurbita maxima]1.5e-10998.58Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFS QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKL+SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_023518711.1 eukaryotic initiation factor 4A-I isoform X2 [Cucurbita pepo subsp. pepo]9.9e-10998.58Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETF Q
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKL+SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

TrEMBL top hitse value%identityAlignment
A0A0A0KFR9 Uncharacterized protein1.5e-10292.42Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAID  EAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELD+VCSAVSNL YISLASLYSDLAEADR+LILE FRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQK +SLS++KCE E+ GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A1S3B0P7 eukaryotic initiation factor 4A-I isoform X11.1e-10293.36Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILE FRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQK +SLS++KCE E+ GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A6J1BYR5 eukaryotic initiation factor 4A-I isoform X11.5e-10292.89Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSH S HFSQ RHFYVAVDR+QFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADR  ILETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        T+SRWSQ  +S S+DKCEVE+DGEKSHMIVVTDACLPLLASGESPLSAHVLINY LPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A6J1HF44 eukaryotic initiation factor 4A-I isoform X23.9e-111100Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A6J1KPZ3 eukaryotic initiation factor 4A-I isoform X27.4e-11098.58Show/hide
Query:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ
        MAIDGIEAFSPPSHPSSHFS QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQ
Subjt:  MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQ

Query:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKL+SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKLNSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

SwissProt top hitse value%identityAlignment
A1D7N3 ATP-dependent RNA helicase eIF4A3.8e-1023.56Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R +I++ FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY+LP  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

A4QVP2 ATP-dependent RNA helicase eIF4A2.2e-1024.08Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R LI++ FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY+LP  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

A7TK55 ATP-dependent RNA helicase eIF4A3.8e-1025.26Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FY+ V+  Q+K + L  L D      +   ++ C++R +++ +   ++   + +++S+YSDL + +R +I++ FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI
             +++ TD    LLA G       ++INY+LPT KE Y+ R+         G+ IN V   +V  ++ IE+     I E+P +++E+
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI

O02494 Eukaryotic initiation factor 4A1.8e-1227.75Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        R FYV V++ ++KM+TL+ L +       +  I+ C++R  +D +   +    + + +S++ D+ + DR +I+  FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY+LP   ETY+ R+         G+ IN V   ++V L+ IE      I EMP+ I++IL
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

Q4P331 ATP-dependent RNA helicase eIF4A4.5e-1124.61Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FYVAV++  +K++TL  L +          ++ C++R ++D +   +++ ++ ++++++ D+ +A R +I+  FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY+LP+ +E Y+ R+         G+ IN V   +V  L+ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

Arabidopsis top hitse value%identityAlignment
AT1G72730.1 DEA(D/H)-box RNA helicase family protein2.8e-0822.51Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FYV VD+ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+  FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN++LPT+ E Y+ R+         G+ IN +   +   +  I+    +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT3G13920.1 eukaryotic translation initiation factor 4A13.6e-0823.04Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+  FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN++LPT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT3G13920.3 eukaryotic translation initiation factor 4A13.6e-0823.04Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED
        + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+  FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVEED

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN++LPT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT4G37020.1 BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1)1.5e-7568.4Show/hide
Query:  IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTT
        +D +EA S P    S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELDAVCS++S L YISLA+LYSDLA+ +RA+++E FRQ T
Subjt:  IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTT

Query:  SRWSQKLNSLSDDKCEVEEDGEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          W+Q+LNS+ ++  E  E+G++   SH++VVTD CLPLL+SGES LSA VLINYELPTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWSQKLNSLSDDKCEVEEDGEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINISEIL
        IAEMPINISEIL
Subjt:  IAEMPINISEIL

AT4G37020.2 FUNCTIONS IN: molecular_function unknown1.4e-7367.31Show/hide
Query:  IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTT
        +D +EA S P    S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELDAVCS++S L YISLA+LYSDLA+ +RA+++E FRQ T
Subjt:  IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTT

Query:  SRWSQKLNSLSDDKCEVEEDGEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          W+Q+LNS+ ++  E  E+G++   SH++VVTD CLPLL+SGES LSA VLINYELPTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWSQKLNSLSDDKCEVEEDGEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINI
        IAEMPIN+
Subjt:  IAEMPINI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTGATGGAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTCGACAGGCTCCAGTTCAAGATGGA
AACATTAGTGGGTTTGTTGGACGTAGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACC
TCCAATACATCTCTTTGGCATCTTTGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGATTTTAGAGACATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGCTCAAT
TCTCTATCAGATGACAAATGTGAGGTTGAGGAAGATGGTGAAAAATCTCACATGATTGTAGTAACAGACGCTTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTC
TGCCCATGTTTTGATAAATTATGAGCTACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTAATCAACATGGTTGTTGGGG
GAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCCGAGATGCCCATTAACATTTCTGAAATTTTATGA
mRNA sequenceShow/hide mRNA sequence
AGTAGTCACAAGGCAGAAGAGAGGCACGTGAGGTTTGTGTTCAGGAAAGACCTCAGCCCTCGAACTTGGAAGCTTTCAGGTGAGAGCGCTGTGCAGCGGTGCAGCGACCA
TGGCAATTGATGGAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTCGACAGGCTCCAGTTCAAGATGGAA
ACATTAGTGGGTTTGTTGGACGTAGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACCT
CCAATACATCTCTTTGGCATCTTTGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGATTTTAGAGACATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGCTCAATT
CTCTATCAGATGACAAATGTGAGGTTGAGGAAGATGGTGAAAAATCTCACATGATTGTAGTAACAGACGCTTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTCT
GCCCATGTTTTGATAAATTATGAGCTACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTAATCAACATGGTTGTTGGGGG
AGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCCGAGATGCCCATTAACATTTCTGAAATTTTATGAGAATGCATATGAAGACAACACAGAA
GGTTCGCTTGTAGAGGTCTTGAACTGTGTCATCTGATCAACGAAGTTGATCATATCAATGATATCTTATGTTTTCAGATCATTCCTTATTAAATTGTAAGAACAAAATTT
GTAATTTAACATTTTAGTTGCTACTTTCTTTTTGAAATGTTATATATCATAAATTCGGTTCAAATTAACCAACACCTTCTCAAAA
Protein sequenceShow/hide protein sequence
MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLN
SLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL