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CmoCh07G007290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G007290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptiontRNA Delta(2)-isopentenylpyrophosphate transferase, putative
Genome locationCmo_Chr07:3293737..3294036
RNA-Seq ExpressionCmoCh07G007290
SyntenyCmoCh07G007290
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB55919.1 hypothetical protein L484_008270 [Morus notabilis]7.4e-0749.33Show/hide
Query:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        V+ VE RHLKS+R ++C+K         G ++ +      A +R E +TSKAE   DFRPT+PGHSPGVGH INN
Subjt:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

KAE8647497.1 hypothetical protein Csa_004238, partial [Cucumis sativus]5.1e-1666.23Show/hide
Query:  VYVECRHLKSSR-CKKCTKFI--NPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        VYVECRHLKSSR CKKC+K I  +PP          P  +  AGN Q+F T KAE PQDFRPTSPGHSPGVGHHINN
Subjt:  VYVECRHLKSSR-CKKCTKFI--NPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

KAF5736125.1 hypothetical protein HS088_TW14G00260 [Tripterygium wilfordii]8.8e-0853.25Show/hide
Query:  VVYVE--CRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        VV+VE   RHLKS  CKKC    +   +N   K    GD  L G+ QE +TSK E    FRPT+PGHSPGVGH INN
Subjt:  VVYVE--CRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

KAG6595044.1 hypothetical protein SDJN03_11597, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3783.84Show/hide
Query:  MKTTQRLSG---------------VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        MKTTQRLSG               VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKA PGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
Subjt:  MKTTQRLSG---------------VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

TKY55726.1 hypothetical protein E2542_SST20145 [Spatholobus suberectus]3.3e-0749.35Show/hide
Query:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLA--GNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        V++VE RHL+S  CK+C K    P  N     A  GD G++  G  QE       +  DFRPTSPGHSPGVGH INN
Subjt:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLA--GNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

TrEMBL top hitse value%identityAlignment
A0A061DGB8 tRNA Delta(2)-isopentenylpyrophosphate transferase, putative8.0e-0752Show/hide
Query:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        V  VE RHL+S  CKKC++     A     K    G     G+ QE +TSKAE   DFRPTSPGHSPGVGH I N
Subjt:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

A0A0A0KGB6 Uncharacterized protein2.5e-1666.23Show/hide
Query:  VYVECRHLKSSR-CKKCTKFI--NPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        VYVECRHLKSSR CKKC+K I  +PP          P  +  AGN Q+F T KAE PQDFRPTSPGHSPGVGHHINN
Subjt:  VYVECRHLKSSR-CKKCTKFI--NPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

A0A6N2MKA4 Uncharacterized protein3.0e-0650Show/hide
Query:  VYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        V VE R LKS  CK+C+   N  +VN+       G+ GLA  ++  KTSK    +DFRPT PGHSPGVGH +NN
Subjt:  VYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

A0A7J7CPU4 Uncharacterized protein4.3e-0853.25Show/hide
Query:  VVYVE--CRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        VV+VE   RHLKS  CKKC    +   +N   K    GD  L G+ QE +TSK E    FRPT+PGHSPGVGH INN
Subjt:  VVYVE--CRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

W9R6N3 Uncharacterized protein3.6e-0749.33Show/hide
Query:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN
        V+ VE RHLKS+R ++C+K         G ++ +      A +R E +TSKAE   DFRPT+PGHSPGVGH INN
Subjt:  VVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAACTCAAAGGCTTTCTGGGGTTGTTTACGTAGAATGTCGGCATCTCAAGTCCTCAAGATGCAAAAAATGCACGAAATTCATCAATCCGCCGGCGGTTAATCT
CGGTGGAAAGAAGGCGGCCCCCGGCGATGTGGGTTTGGCCGGAAATCGTCAAGAATTTAAGACGAGCAAAGCAGAACAACCTCAAGACTTCCGTCCCACATCGCCTGGGC
ACAGTCCTGGAGTTGGCCATCATATCAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAACTCAAAGGCTTTCTGGGGTTGTTTACGTAGAATGTCGGCATCTCAAGTCCTCAAGATGCAAAAAATGCACGAAATTCATCAATCCGCCGGCGGTTAATCT
CGGTGGAAAGAAGGCGGCCCCCGGCGATGTGGGTTTGGCCGGAAATCGTCAAGAATTTAAGACGAGCAAAGCAGAACAACCTCAAGACTTCCGTCCCACATCGCCTGGGC
ACAGTCCTGGAGTTGGCCATCATATCAACAACTGA
Protein sequenceShow/hide protein sequence
MKTTQRLSGVVYVECRHLKSSRCKKCTKFINPPAVNLGGKKAAPGDVGLAGNRQEFKTSKAEQPQDFRPTSPGHSPGVGHHINN