CuGenDBv2

Gene ID	CmoCh07G007390
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr07:3357763..3362772
RNA-Seq Expression	CmoCh07G007390
Synteny	CmoCh07G007390
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

THU71584.1 hypothetical protein C4D60_Mb04t03000 [Musa balbisiana]

2.8e-07

35.04

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Query:  KDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLDLEP
        +D+G  V  +  +G  ++RGS L+ EP+H  S + A++A+ ++   L   K GH +QQ LRVV     +L+   VDA G  V++R  V    +Q   L P
Subjt:  KDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLDLEP

Query:  APSSMARSVNKYKMLLL
         P SMA ++++  +LL+
Subjt:  APSSMARSVNKYKMLLL

TrEMBL top hits

e value

%identity

Alignment

A0A0E0JTD3 Uncharacterized protein

1.7e-10

34.88

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Query:  SYVFDGKSNRYLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYT
        +Y F      YL+     ++   R +G  E+ G  LVREPLH   + EAA A+  +   L  R  G  ++QR RV+  G H++D   V AR  HV++R  
Subjt:  SYVFDGKSNRYLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYT

Query:  VASSLEQGLDLEPAPSSMARSVNKYKMLL
        V    ++G    PAP ++A +V++ +MLL
Subjt:  VASSLEQGLDLEPAPSSMARSVNKYKMLL

A0A0E0JTD4 Uncharacterized protein

1.7e-10

34.88

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Query:  SYVFDGKSNRYLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYT
        +Y F      YL+     ++   R +G  E+ G  LVREPLH   + EAA A+  +   L  R  G  ++QR RV+  G H++D   V AR  HV++R  
Subjt:  SYVFDGKSNRYLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYT

Query:  VASSLEQGLDLEPAPSSMARSVNKYKMLL
        V    ++G    PAP ++A +V++ +MLL
Subjt:  VASSLEQGLDLEPAPSSMARSVNKYKMLL

A0A0E0JTD6 Uncharacterized protein

2.9e-10

36.13

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Query:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD
        YL+     ++   R +G  E+ G  LVREPLH   + EAA A+  +   L  R  G  ++QR RV+  G H++D   V AR  HV++R  V    ++G  
Subjt:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD

Query:  LEPAPSSMARSVNKYKMLL
          PAP ++A +V++ +MLL
Subjt:  LEPAPSSMARSVNKYKMLL

A0A0E0JTD9 Uncharacterized protein

2.9e-10

36.13

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Query:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD
        YL+     ++   R +G  E+ G  LVREPLH   + EAA A+  +   L  R  G  ++QR RV+  G H++D   V AR  HV++R  V    ++G  
Subjt:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD

Query:  LEPAPSSMARSVNKYKMLL
          PAP ++A +V++ +MLL
Subjt:  LEPAPSSMARSVNKYKMLL

A0A0E0JTE0 Uncharacterized protein

2.9e-10

36.13

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Query:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD
        YL+     ++   R +G  E+ G  LVREPLH   + EAA A+  +   L  R  G  ++QR RV+  G H++D   V AR  HV++R  V    ++G  
Subjt:  YLIKDIGRLVVSVRDKGRHENRGSYLVREPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLD

Query:  LEPAPSSMARSVNKYKMLL
          PAP ++A +V++ +MLL
Subjt:  LEPAPSSMARSVNKYKMLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACTTGTACTGTTTTCATAGGTGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACCTCGATCTATTGGGGATGTATGGGGCTGCGTGTATATGCGGGAAATATAAA
TCTCATGCTTGGTACATTCGAGCTATATAACCCATCTTATTTTATTGCAGAAATCGTCAAAGCCAAAGTCCCGAACTGCTCGGCGCTACTAGTCATAAATGACCATCTAC
AAGTAACAACTGATGAAAAAACAGCCAAGGATTACGAGACATATCTGGCATATCTTCGAGGAAAGGCCAATTTCTTAGTCATTGACAGTTCTCTATCAGATTATTCTACA
TGCAGTAAAAGCCTAAAGGAAACAGCTCGAGTGTTTATCAGATATTCTTCTTGGACCAGTGGTTGCATCTCTGAGCCGCCATCAGGATTGGCAAGAGCAAAGGCTGTCAA
GAAAACAGAAGCTTCTATCTTTGCAGGGAACTTCTCCATGGCCACAACCAAGCGGCTTGATATTGTACCAGGTCCATGCTCCATGGCAAGCCCCATGAACCAATACAAAA
TGCCTCTGCTCCATGTGATCGAGGCAGAGATTGACAGTGACAATATTATTGAGATGTGTAAAGAGTTGAAGATTTTACAACGACAAAACTTAGTTGAAACAAAGAAATTT
GTTTTAAGTTGGGGGACAAATGAAGAAATAGACATTGCAATAGAAAAAACAAAGAACAAAAGAACAAAAACGAGAGGCGCAGCTGACAGCAACCTGAAGGAGACAGTGGA
GAAGCTGGTGAGGCTTGCAAAACATGGGCATGTGATCAGAGCCGTTTATTTCCATCACATTTTCAATCCCACCGTTGTGGATCATCCACTTTTGGAACTCCTCTGGGATT
CCTATGTCTTCGACGGTAAAAGTAATAGGTACCTGATCAAGGACATAGGAAGGCTTGTGGTCAGTGTCAGGGACAAAGGCCGCCACGAAAACAGAGGCAGCTATCTTGTC
CGGGAACCTCTCCATAGCCACAGCCAAGTTGAAGCCGCCAAGGCTATGACCCACCAATATCACCTTTTGATTTGGAGGAAGACAGGCCATGACCTTCAACAAAGGCTCAG
AGTAGTCTACAATGGAGTGCACATCTTGGATGACCTTCCTGTGGATGCCCGAGGCAGCCATGTCCAGCAGCGTTACACGGTGGCCAGCAGCCTCGAGCAGGGGCTTGATC
TTGAACCAGCTCCAAGCTCCATGGCACGCTCCGTGAACAAATACAAAATGCTTTTGCTCCATTTGAGTCAAGTCTCTTCCAAAAATTATGTTCAGAGGACTTGCCAAACT
CTTGGTGGCTACAAGTCATGGTGGATTTAA

mRNA sequence

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Protein sequence

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MTCTVFIGAATGSGASFGATSIYWGCMGLRVYAGNINLMLGTFELYNPSYFIAEIVKAKVPNCSALLVINDHLQVTTDEKTAKDYETYLAYLRGKANFLVIDSSLSDYST
CSKSLKETARVFIRYSSWTSGCISEPPSGLARAKAVKKTEASIFAGNFSMATTKRLDIVPGPCSMASPMNQYKMPLLHVIEAEIDSDNIIEMCKELKILQRQNLVETKKF
VLSWGTNEEIDIAIEKTKNKRTKTRGAADSNLKETVEKLVRLAKHGHVIRAVYFHHIFNPTVVDHPLLELLWDSYVFDGKSNRYLIKDIGRLVVSVRDKGRHENRGSYLV
REPLHSHSQVEAAKAMTHQYHLLIWRKTGHDLQQRLRVVYNGVHILDDLPVDARGSHVQQRYTVASSLEQGLDLEPAPSSMARSVNKYKMLLLHLSQVSSKNYVQRTCQT
LGGYKSWWI

CmoCh07G007390 (gene) of Cucurbita moschata (Rifu) v1 genome