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CmoCh07G008060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X2
Genome locationCmo_Chr07:3715163..3716381
RNA-Seq ExpressionCmoCh07G008060
SyntenyCmoCh07G008060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595113.1 hypothetical protein SDJN03_11666, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4695.41Show/hide
Query:  MGACATKPKVLQLHSRQSPEPP----PAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWE
        MGACATKPKVLQ HSRQSPEPP    PAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWE
Subjt:  MGACATKPKVLQLHSRQSPEPP----PAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWE

Query:  AEKEVKVIN
        AEKEVKVIN
Subjt:  AEKEVKVIN

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]6.7e-0537.11Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTAD-------IVDDHKNEGKEKAAAAAE-------TPPETETE---------KETNPPEPPPSDDVTDKT
        MGACATKPK ++  S ++PE  P AETK D          +VDD K EG ++    A+        PPETE +          E NPPEP  SD VT+  
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTAD-------IVDDHKNEGKEKAAAAAE-------TPPETETE---------KETNPPEPPPSDDVTDKT

Query:  TVV------ETPCETKKENNPTN-------------------------WEAEKEVKVIN
        TV+      ETP E  KE +P N                          E EKEVKVIN
Subjt:  TVV------ETPCETKKENNPTN-------------------------WEAEKEVKVIN

XP_022963155.1 uncharacterized protein LOC111463450 isoform X1 [Cucurbita moschata]7.5e-49100Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
        MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE

Query:  VKVIN
        VKVIN
Subjt:  VKVIN

XP_022963156.1 uncharacterized protein LOC111463450 isoform X2 [Cucurbita moschata]3.2e-3988.57Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
        MGACATKPKVLQLHSRQSP            ADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE

Query:  VKVIN
        VKVIN
Subjt:  VKVIN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]4.3e-0438.76Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPP-------AAETKRD------TADIVDDHKNEGK----EKAAAAAETPPE------------------TETEKETNPP
        MGACATKPKVL+  + ++P P P       AA TK +        +IVDD K EGK    EK     E PPE                   E   E NPP
Subjt:  MGACATKPKVLQLHSRQSPEPPP-------AAETKRD------TADIVDDHKNEGK----EKAAAAAETPPE------------------TETEKETNPP

Query:  EPPP--SDDVTDKTTVVETPCETKKENNP
        EP P  SD VT+    +E+P E+ KE++P
Subjt:  EPPP--SDDVTDKTTVVETPCETKKENNP

TrEMBL top hitse value%identityAlignment
A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X23.2e-0537.11Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTAD-------IVDDHKNEGKEKAAAAAE-------TPPETETE---------KETNPPEPPPSDDVTDKT
        MGACATKPK ++  S ++PE  P AETK D          +VDD K EG ++    A+        PPETE +          E NPPEP  SD VT+  
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTAD-------IVDDHKNEGKEKAAAAAE-------TPPETETE---------KETNPPEPPPSDDVTDKT

Query:  TVV------ETPCETKKENNPTN-------------------------WEAEKEVKVIN
        TV+      ETP E  KE +P N                          E EKEVKVIN
Subjt:  TVV------ETPCETKKENNPTN-------------------------WEAEKEVKVIN

A0A6J1HFA8 uncharacterized protein LOC111463450 isoform X21.5e-3988.57Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
        MGACATKPKVLQLHSRQSP            ADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE

Query:  VKVIN
        VKVIN
Subjt:  VKVIN

A0A6J1HH69 uncharacterized protein LOC111463450 isoform X13.6e-49100Show/hide
Query:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
        MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE
Subjt:  MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKE

Query:  VKVIN
        VKVIN
Subjt:  VKVIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCCAAGGTTCTTCAGCTTCATTCCCGCCAGTCTCCGGAGCCTCCTCCGGCCGCCGAAACTAAACGGGACACCGCGGATATCGTGGATGA
TCACAAGAACGAAGGTAAGGAGAAGGCGGCGGCAGCAGCAGAGACCCCACCGGAAACTGAAACTGAAAAAGAAACCAACCCACCGGAGCCGCCACCCTCCGATGATGTAA
CAGACAAGACAACGGTGGTGGAAACTCCATGTGAGACAAAGAAGGAAAATAACCCAACAAATTGGGAAGCAGAGAAAGAAGTTAAGGTAATTAATTAG
mRNA sequenceShow/hide mRNA sequence
TTCCTTCTCTCTCATCTCATTTCATTTCCATTCATTTTGAGATCGACTAAGCAGATGGGAGCTTGTGCCACTAAGCCCAAGGTTCTTCAGCTTCATTCCCGCCAGTCTCC
GGAGCCTCCTCCGGCCGCCGAAACTAAACGGGACACCGCGGATATCGTGGATGATCACAAGAACGAAGGTAAGGAGAAGGCGGCGGCAGCAGCAGAGACCCCACCGGAAA
CTGAAACTGAAAAAGAAACCAACCCACCGGAGCCGCCACCCTCCGATGATGTAACAGACAAGACAACGGTGGTGGAAACTCCATGTGAGACAAAGAAGGAAAATAACCCA
ACAAATTGGGAAGCAGAGAAAGAAGTTAAGGTAATTAATTAGCAGCAATTAAGATTAAGAAACTTGGTGTCTCATTTATTCTTCCATGCTTTTTGTTGTTTTTTTTTGTG
TTTCAATTTTCATAACATAAATATTACTTTTTAATTTAATTTAATTTCATTTTGGTGAGACTGAGGCC
Protein sequenceShow/hide protein sequence
MGACATKPKVLQLHSRQSPEPPPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKEVKVIN