; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G008310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationCmo_Chr07:3887517..3888844
RNA-Seq ExpressionCmoCh07G008310
SyntenyCmoCh07G008310
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595132.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.3e-8698.83Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPE+KNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_022963255.1 photosystem I reaction center subunit N, chloroplastic-like isoform X1 [Cucurbita moschata]1.1e-86100Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023003251.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita maxima]7.3e-8698.83Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAASSNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023518442.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]3.3e-8699.42Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]4.9e-8293.57Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRA+QARVPEAKNEGRRTALL+LGA+LFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A1S3B240 photosystem I reaction center subunit N, chloroplastic5.3e-8292.98Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRA+QARVPEAKNEGRRTALL+LGA+LFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N5.3e-8292.98Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRA+QARVPEAKNEGRRTALL+LGA+LFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1GG47 photosystem I reaction center subunit N, chloroplastic-like5.9e-8191.81Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+L+SK++A  SVASPGV GYKLPAIRA+QARVPEAKN+GRR+ALL+LGA+LFAAAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1HHG7 photosystem I reaction center subunit N, chloroplastic-like isoform X15.5e-87100Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1KNN3 photosystem I reaction center subunit N, chloroplastic isoform X13.6e-8698.83Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAASSNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)1.5e-4183.87Show/hide
Query:  SSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ++  SA A + +EYLEKSKANKELNDKKRLATSGANFARAYTV+FGSC+FP NFTGCQDLAKQKKVPFISDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic6.5e-4576.61Show/hide
Query:  ARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFI
        A   RV  A  + RR+ALL L A++FAA AAS+  SA A V +EYLEKSK NKELNDKKR ATSGANFARAYTVQFGSCKFP NFTGCQDLAKQKKVPFI
Subjt:  ARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFI

Query:  SDDLELECEGKDKYKCGSNVFWKW
        +DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic8.8e-5868.79Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+A++    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TVQFGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic8.3e-2454.4Show/hide
Query:  KLPAIR-ARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAK
        K+ A R AR   V    +   R  LL LG  L AAA A    +ANAGV+E+ L KS ANK LN+KKRLATS AN AR+ TV  G+C+FPENF GC++LA 
Subjt:  KLPAIR-ARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAK

Query:  QKKVPFISDDLELECEGKDKYKCGS
         K V +I++DL++ECEGKD   CGS
Subjt:  QKKVPFISDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)6.2e-5968.79Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+A++    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TVQFGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)2.2e-4064.58Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+A++    +   + GRR+A++FL A+LF+ AA S  +SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYK-LPAIRARQARVPEAK-NEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TVQFGSCKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCGACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTG
CTGCGGCTGCTGCTTCCTCCAACTCTTCGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAGCTGAATGACAAGAAAAGATTAGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTAT
CTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCGACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTG
CTGCGGCTGCTGCTTCCTCCAACTCTTCGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAGCTGAATGACAAGAAAAGATTAGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTAT
CTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGAAGAGAACAGAACAATTTATTGAAGTCTTTGTATC
TAATTTTCAACTTTTAAGAAGTGTGAAATTTTATTTAGTCCAATTCCATTGCTTTCTTTCTTCTCTTTCAGACCAAAAGAAGCCAAATGAGAAAGTAGAAACCCTAGAAA
TCTATTGCTTTAGCTTTGTTAATGTTAATAATGTTCGGGAAGGTAACTAAAAGATATATTTAATAGTCCATTTGAGCCTAATTCAAT
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRARQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLAT
SGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW