; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G008340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSWIM-type domain-containing protein
Genome locationCmo_Chr07:3891460..3900651
RNA-Seq ExpressionCmoCh07G008340
SyntenyCmoCh07G008340
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148660.1 uncharacterized protein LOC101204643 isoform X1 [Cucumis sativus]2.6e-4289.25Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+DDENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

XP_008441058.1 PREDICTED: uncharacterized protein LOC103485285 [Cucumis melo]7.6e-4288.17Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+D+ENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

XP_023003249.1 uncharacterized protein LOC111496915 isoform X1 [Cucurbita maxima]3.0e-4694.79Show/hide
Query:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        SNTMTTELHSTYWLD YADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKD SVSH+VWNPGSEFSFCACSWSMQ NLCKH+
Subjt:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

XP_023003250.1 uncharacterized protein LOC111496915 isoform X2 [Cucurbita maxima]1.3e-4679.17Show/hide
Query:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHIWILI
        SNTMTTELHSTYWLD YADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKD SVSH+VWNPGSEFSFCACSWSMQ NLCKH+  + 
Subjt:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHIWILI

Query:  HEGDCNIDVSLLEKNVERLE
          G     +SL  ++  ++E
Subjt:  HEGDCNIDVSLLEKNVERLE

XP_031743010.1 uncharacterized protein LOC101204643 isoform X2 [Cucumis sativus]2.6e-4289.25Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+DDENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

TrEMBL top hitse value%identityAlignment
A0A0A0KIZ0 SWIM-type domain-containing protein1.3e-4289.25Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+DDENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

A0A1S3B2L2 uncharacterized protein LOC1034852853.7e-4288.17Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+D+ENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

A0A5A7SLI4 SWIM zinc finger family protein3.7e-4288.17Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHSTYWLD YADESDSFQNVK+EYISSTSWHRALQIPDSSVT+D+ENHLFA+VLSQKD S+SHVVWNPGSEFSFC CSWSMQ NLCKH+
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

A0A6J1KR90 uncharacterized protein LOC111496915 isoform X26.5e-4779.17Show/hide
Query:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHIWILI
        SNTMTTELHSTYWLD YADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKD SVSH+VWNPGSEFSFCACSWSMQ NLCKH+  + 
Subjt:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHIWILI

Query:  HEGDCNIDVSLLEKNVERLE
          G     +SL  ++  ++E
Subjt:  HEGDCNIDVSLLEKNVERLE

A0A6J1KSS4 uncharacterized protein LOC111496915 isoform X11.5e-4694.79Show/hide
Query:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        SNTMTTELHSTYWLD YADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKD SVSH+VWNPGSEFSFCACSWSMQ NLCKH+
Subjt:  SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60560.1 SWIM zinc finger family protein1.6e-3772.04Show/hide
Query:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        +TTELHS+YWLD YADESDSFQNVK+EYI+STSW+RA++IPDS+VT+D+ N L A+V SQ+D  V+ VVWNPGSEF+FC C+WS+Q NLCKHI
Subjt:  MTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI

AT4G13970.1 zinc ion binding3.4e-1641.3Show/hide
Query:  TELHSTYWLDLYADESDSFQNVKDEYISS-TSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI
        T++HS +WLD Y+ + +  +  K+E++S  TS+ +AL IPDS V +   + + A++  + DG+  HVVWNPGS+F  C+CSW+ +  +CKH+
Subjt:  TELHSTYWLDLYADESDSFQNVKDEYISS-TSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCTCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTG
GCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGACGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACGGCAGTGTTTCACATGTAGTGTGGA
ATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAACGAAATCTTTGCAAACACATATGGATTCTGATACACGAAGGAGATTGTAACATAGACGTCTCA
CTCCTGGAGAAGAACGTGGAAAGACTCGAGCTTCCGAGGAGGCTTCTCCCATGGTTGCTCCAACACCTTAGCCTCATATTTTCGAGGATAATTTGCACCAACATCAACCA
ACAACACAAGCTTGAACGGAACTCATCGTCACTTAGAACAGATAGTCGACAAGCTTTGAAATTGTATGCTCACTTCCAAACAAGAGCTAGAGAAGAAACCAAATCATTAG
ACCCATCAATTAAGAAGTTTCTTAATTCTAAAGATCAACGGGGCGATACTATATGGATTCTGATACACGAAGGAGATTGTAACATAGACATCTCACTCCTGGAGAAGAAC
GTGGAAAGACTCGAGCTTCCGAGGAGGCTTCTCCCATGCTTGCTCCAACACCTTAGCCTCATATTTTCGAGGATAATTTGCACCAACATCAACCAACAACACAAGCTTAT
AAAGAAAAACGATCCTATCTACATAAAGAATGGGATCCGTAGATATCCTCCAAGAAAGTCAGAACTCAATCTCCTCAAACAATCTTACATTACGTGCTTTCTTCTCTCCC
TCATGCCAACGCACACAATTGTAGGCGATATGGATTTTGATACGAAGGAGATTCCTCATACTTTCGATGATGATTTGCACCAACATCAACCAACAACACAAGCTCGTACA
TATCTCCAGACACTAGTTGCTTCGACCCACTTACCACTTCAAGAAACTTTAGTGAATCCCCACTTTGTTTGTTGTATAAAGAAAAACGTTCCTATCTACATAAAGAATGT
GATCCGTAGATATCCTTCAAGAAAGGTGCTAATGACGAAGAAGAACAGCAACACTTATAAAGATTTACGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGCTT
TCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTCCGAATTTCGTTTTGTCTGATGCTATGGTTTGTTTTCTA
TTGCTCATGTCTGGGAATTCTTAG
mRNA sequenceShow/hide mRNA sequence
TCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCTCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTG
GCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGACGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACGGCAGTGTTTCACATGTAGTGTGGA
ATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAACGAAATCTTTGCAAACACATATGGATTCTGATACACGAAGGAGATTGTAACATAGACGTCTCA
CTCCTGGAGAAGAACGTGGAAAGACTCGAGCTTCCGAGGAGGCTTCTCCCATGGTTGCTCCAACACCTTAGCCTCATATTTTCGAGGATAATTTGCACCAACATCAACCA
ACAACACAAGCTTGAACGGAACTCATCGTCACTTAGAACAGATAGTCGACAAGCTTTGAAATTGTATGCTCACTTCCAAACAAGAGCTAGAGAAGAAACCAAATCATTAG
ACCCATCAATTAAGAAGTTTCTTAATTCTAAAGATCAACGGGGCGATACTATATGGATTCTGATACACGAAGGAGATTGTAACATAGACATCTCACTCCTGGAGAAGAAC
GTGGAAAGACTCGAGCTTCCGAGGAGGCTTCTCCCATGCTTGCTCCAACACCTTAGCCTCATATTTTCGAGGATAATTTGCACCAACATCAACCAACAACACAAGCTTAT
AAAGAAAAACGATCCTATCTACATAAAGAATGGGATCCGTAGATATCCTCCAAGAAAGTCAGAACTCAATCTCCTCAAACAATCTTACATTACGTGCTTTCTTCTCTCCC
TCATGCCAACGCACACAATTGTAGGCGATATGGATTTTGATACGAAGGAGATTCCTCATACTTTCGATGATGATTTGCACCAACATCAACCAACAACACAAGCTCGTACA
TATCTCCAGACACTAGTTGCTTCGACCCACTTACCACTTCAAGAAACTTTAGTGAATCCCCACTTTGTTTGTTGTATAAAGAAAAACGTTCCTATCTACATAAAGAATGT
GATCCGTAGATATCCTTCAAGAAAGGTGCTAATGACGAAGAAGAACAGCAACACTTATAAAGATTTACGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGCTT
TCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTCCGAATTTCGTTTTGTCTGATGCTATGGTTTGTTTTCTA
TTGCTCATGTCTGGGAATTCTTAG
Protein sequenceShow/hide protein sequence
SNTMTTELHSTYWLDLYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDGSVSHVVWNPGSEFSFCACSWSMQRNLCKHIWILIHEGDCNIDVS
LLEKNVERLELPRRLLPWLLQHLSLIFSRIICTNINQQHKLERNSSSLRTDSRQALKLYAHFQTRAREETKSLDPSIKKFLNSKDQRGDTIWILIHEGDCNIDISLLEKN
VERLELPRRLLPCLLQHLSLIFSRIICTNINQQHKLIKKNDPIYIKNGIRRYPPRKSELNLLKQSYITCFLLSLMPTHTIVGDMDFDTKEIPHTFDDDLHQHQPTTQART
YLQTLVASTHLPLQETLVNPHFVCCIKKNVPIYIKNVIRRYPSRKVLMTKKNSNTYKDLRNFFCSKLFKKLLAFLRTSSSFELFSCFTVTARFKSRTPNFVLSDAMVCFL
LLMSGNS