; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G008740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationCmo_Chr07:4124423..4127069
RNA-Seq ExpressionCmoCh07G008740
SyntenyCmoCh07G008740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-76100Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

KAG6604338.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6793.84Show/hide
Query:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV
        LTNVLDL  +V R VRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTV
Subjt:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV

Query:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022963366.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]1.6e-76100Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]1.3e-7598.64Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLPW+VPRGVRGTWM+LIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_023518928.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo]1.1e-7498.64Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLP +VPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein1.7e-6097.58Show/hide
Query:  IISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI
        +I AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI
Subjt:  IISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI

Query:  EFVSFFIFVCTVLCFHRVSLEDDW
        EFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  EFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1EE43 vacuolar protein sorting-associated protein 55 homolog isoform X14.1e-6793.15Show/hide
Query:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV
        LTNVLDL  +V R VRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTV
Subjt:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV

Query:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X17.5e-77100Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X16.4e-7698.64Show/hide
Query:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
        MLTNVLDLPW+VPRGVRGTWM+LIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1IRY1 vacuolar protein sorting-associated protein 55 homolog isoform X11.7e-6589.73Show/hide
Query:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV
        LTNVLDL   V R +RGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFL SRDGGGWIGAAKFLTGASTV
Subjt:  LTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTV

Query:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        G+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Subjt:  GSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 552.2e-0426.32Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGG----STQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIE
        +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G    ++ F++     G    A FLTG      +A+P++  H  +I   +  + 
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGG----STQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIE

Query:  FVSFFIFVCTVLCF
         +   I   +++ F
Subjt:  FVSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog9.0e-2755.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 557.4e-0527.5Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGST--QFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFV
        + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST   FL   D    +   +F  GA+     A+PI+  +  +I T A  +  V
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGST--QFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFV

Query:  SFFIFVCTVLCFHRVSLEDD
           I    +  + +  ++ +
Subjt:  SFFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein6.4e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein6.4e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein6.4e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein8.9e-5486.73Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein8.9e-5486.73Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACTAATGTTCTTGATCTTCCTTGGTTGGTGCCTCGTGGTGTTCGGGGAACATGGATGAATCTCATCATATCTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTC
ATCAAGCATCTTGCTACAGATCTTGGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTCGGAG
GTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGATGGATCGGTGCTGCTAAATTCTTGACGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCTATTATCCTC
AGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTTGTTTGCACCGTATTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTG
GTGA
mRNA sequenceShow/hide mRNA sequence
TTGGTCCATTTGTTGCTCATTTTGACATTCTGTATCTTAATTTAATGTTAACTAATGTTCTTGATCTTCCTTGGTTGGTGCCTCGTGGTGTTCGGGGAACATGGATGAAT
CTCATCATATCTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCAAGCATCTTGCTACAGATCTTGGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGC
TTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTCGGAGGTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGATGGATCGGTGCTGCTAAATTCTTGA
CGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTTGTT
TGCACCGTATTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGATCCATTAGTGAAGCAAATCAGTGCTACGATGAATGTAAAAACTTCCTCCGTTGAATTTTAAT
GCGTGGTCTTCTTAACAGTTGATTCAAGACCTTGTATAACAAGATGAAACTTAGCACTGGAAAAGGGAGATCGAGCTCGAAGTATCTTTGTTGTAAATCAATCTAATGTA
TGATAATAGAAGTGCCCGTTTTCTTCATTTTCTTTTCGCTTACGTTGAAATGCTCGAATCGCTGAAATAATTTTCGTTGAATGTACTTTTATACAAATAAGTTAAACACT
TTTTTGTTTATAGATGCGTGGTTTTCGGTTAA
Protein sequenceShow/hide protein sequence
MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIIL
RHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW