; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G008780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAlpha-amylase
Genome locationCmo_Chr07:4154448..4157992
RNA-Seq ExpressionCmoCh07G008780
SyntenyCmoCh07G008780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]3.3e-9880.89Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MA ITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSG+SSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKI SGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVATCLVLD
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV   LV+D
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVATCLVLD

KAG7027193.1 hypothetical protein SDJN02_11204 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-8473.98Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MA ITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSG+SSPCPRNMNLAPKSSEENT ILPSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKI SGVR  F      K       +CLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVATCLVLD
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV   LV+D
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVATCLVLD

XP_022962862.1 uncharacterized protein LOC111463229 [Cucurbita moschata]2.3e-9983.26Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]9.5e-9881.59Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MA ITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSG+SSPCPRNM+LAPKSSEENTDI PSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV

XP_023517184.1 uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]1.2e-9781.59Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MA ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSG+SSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV

TrEMBL top hitse value%identityAlignment
A0A0A0KFD4 Uncharacterized protein1.5e-7264.85Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF
        M  I++ST   IR+  VNSRP + S+M SH PSLVF   NTR RQ S  S +S PC R   L PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF

Query:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS
        +VLLF                                        QWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS
Subjt:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS

Query:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        SSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

A0A1S3CH91 uncharacterized protein LOC1035009093.0e-7365.27Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF
        M  I++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF

Query:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS
        +VLLF                                        QWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS
Subjt:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS

Query:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        +SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

A0A5A7SHD0 Uncharacterized protein3.0e-7365.27Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF
        M  I++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASH-PSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKF

Query:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS
        +VLLF                                        QWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS
Subjt:  EVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATAS

Query:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        +SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  SSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

A0A6J1HDQ9 uncharacterized protein LOC1114632291.1e-9983.26Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV

A0A6J1I6G0 uncharacterized protein LOC1114711574.6e-9881.59Show/hide
Query:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE
        MA ITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSG+SSPCPRNM+LAPKSSEENTDI PSEDNPEDGVSLGTMKLPSDIDIAKFE
Subjt:  MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFE

Query:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
        VLLF                                        QWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS
Subjt:  VLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASS

Query:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
        SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV
Subjt:  SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36145.1 unknown protein9.0e-3848.97Show/hide
Query:  SGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWAN
        +G +SP      +   +S  N  +   E   EDGVSLGTMKLP D D+A+FE LLF                                        QWAN
Subjt:  SGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQIQNSSPFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWAN

Query:  SLCQGANLPLPVPLRVDKIASGVRLGFISIGD-GKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVAT
        SLCQGANLPLPVPL+VD+I+ G RLGFI + D GKT+V VYIDCLVF  T  +  +F+A RNGR KD++PPGE RIMRSLL ALKK+VEIA  T
Subjt:  SLCQGANLPLPVPLRVDKIASGVRLGFISIGD-GKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACCGTTAATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTTCGTCGG
TTGGAACACTCGGCGTCGGCAATTCTCTAAGCTCTCCGGCATCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGC
CATCGGAAGATAATCCTGAAGACGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGATCCAAAATTCCTCC
CCGTTTCCGTCACGTTTTTGCTTTACAACTTCTATTACCGATGAAGCAAAGGGGGAATTTCATGATCGTTGTGTTTTTTCCCTTCCCCGTTTTGGATTGGAACAGTGGGC
CAATAGTCTTTGCCAGGGAGCCAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGACTTGGTTTTATCTCAATTGGAGATGGAAAGACAG
AAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAATCACCTCCCGGTGAA
CCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGCTACTTGTCTCGTGCTCGATGTTCTTCGAGTAGCGAACGCTTAA
mRNA sequenceShow/hide mRNA sequence
CGAACCTTTCTCCTCACAGAGGCTTCCCATCGCTGAAACGCTATCCTCTCCCTCCCTAGACCTGCAAATCACCAGTAATCTCCATCTCCTTTCTCTCTGCTATTCGGCGT
TGGTTCTTCGCCATCGGATTCATGGCCGTCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACCGTTAATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCA
TCCGTCACTGGTTTTCGTCGGTTGGAACACTCGGCGTCGGCAATTCTCTAAGCTCTCCGGCATCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGG
AGGAGAACACAGATATTTTGCCATCGGAAGATAATCCTGAAGACGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTC
TTCCAGATCCAAAATTCCTCCCCGTTTCCGTCACGTTTTTGCTTTACAACTTCTATTACCGATGAAGCAAAGGGGGAATTTCATGATCGTTGTGTTTTTTCCCTTCCCCG
TTTTGGATTGGAACAGTGGGCCAATAGTCTTTGCCAGGGAGCCAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGACTTGGTTTTATCT
CAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAG
GACCAATCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGCTACTTGTCTCGTGCTCGATGTTCTTCGAGT
AGCGAACGCTTAAGGGGTCGTTTGTTCGGAACAAAGTTTGCAAGCTTGGACATCGACATCAGATGGGCATCTTAAATAAAAAAACTCCAATCGAGTATCTCCCTCTTCTA
CCGGCTCTTGACGAGTGCTCAGAACTCAAAGATGTCTCAATTGTTGAGCGGAAAGGTACAAAATTTTATTTATTTAATTAATTCAAGAGTTGTTGGAATTATTATTGTCT
CGTATTATGCAGCTGTTATTAGCCTCTCGTCTTTGAATATAATTCCA
Protein sequenceShow/hide protein sequence
MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQIQNSS
PFPSRFCFTTSITDEAKGEFHDRCVFSLPRFGLEQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
PRIMRSLLSALKKSVEIAVATCLVLDVLRVANA