; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G008980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G008980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRAB6-interacting golgin
Genome locationCmo_Chr07:4269585..4271020
RNA-Seq ExpressionCmoCh07G008980
SyntenyCmoCh07G008980
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595202.1 hypothetical protein SDJN03_11755, partial [Cucurbita argyrosperma subsp. sororia]3.0e-7698.8Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMR EVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQKREKEYKDAL+AFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

XP_022143816.1 uncharacterized protein LOC111013636 [Momordica charantia]3.8e-6385.37Show/hide
Query:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN
        Q EQN      QLMLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR ++Q KLQARLGRVEEE RRL+SIREELEAI DP RKEIGQIRK+IDAVN
Subjt:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN

Query:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        KELKPLGQTCQK+EKEYKDAL+AFNEKN+EKVQL+SKLMEMVGESERLR++RLEELSKHVDNTS
Subjt:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

XP_022962812.1 uncharacterized protein KIAA1211-like [Cucurbita moschata]3.5e-77100Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

XP_022972692.1 uncharacterized protein KIAA1211-like [Cucurbita maxima]6.7e-7698.19Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMR EVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQK+EKEYKDAL+AFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

XP_023517191.1 uncharacterized protein KIAA1211-like [Cucurbita pepo subsp. pepo]7.9e-7799.4Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQKREKEYKDAL+AFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

TrEMBL top hitse value%identityAlignment
A0A6J1CRG0 RAB6-interacting golgin1.8e-6385.37Show/hide
Query:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN
        Q EQN      QLMLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR ++Q KLQARLGRVEEE RRL+SIREELEAI DP RKEIGQIRK+IDAVN
Subjt:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN

Query:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        KELKPLGQTCQK+EKEYKDAL+AFNEKN+EKVQL+SKLMEMVGESERLR++RLEELSKHVDNTS
Subjt:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

A0A6J1EJF7 RAB6-interacting golgin5.9e-6284.85Show/hide
Query:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAV
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAV

Query:  NKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        NKELKPLGQ CQK+EKEYKDAL+AFNEKN+EKV  +SKLMEMVGESER+RL+RLEELSKHVDN +
Subjt:  NKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

A0A6J1HDL2 RAB6-interacting golgin1.7e-77100Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

A0A6J1I5J6 RAB6-interacting golgin3.2e-7698.19Show/hide
Query:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
        MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMR EVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA
Subjt:  MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDA

Query:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        VNKELKPLGQTCQK+EKEYKDAL+AFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
Subjt:  VNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS

A0A6J1IS07 RAB6-interacting golgin1.2e-6286.5Show/hide
Query:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAV
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAI-ADPMRKEIGQIRKRIDAV

Query:  NKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN
        NKELKPLGQ CQK+EKEYKDAL+AFNEKN+EKVQ +SKLMEMVGESER+RL+RLEELSKHVDN
Subjt:  NKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN

SwissProt top hitse value%identityAlignment
B1H222 RAB6-interacting golgin4.2e-0429.51Show/hide
Query:  REKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLM
        R  EE+ +R +  + Q +  R  R + E  +L  I++EL+A+ D +  +IG +R RID  + E     +   + E EY  A      K   K QL   L 
Subjt:  REKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLM

Query:  EMVGESERLRLRRLEELSKHVD
         ++ ++E  + ++LEEL + +D
Subjt:  EMVGESERLRLRRLEELSKHVD

Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)7.7e-4661.31Show/hide
Query:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI
        Q++  PQ  QQ   M+ ++G+ SFS   S++DEEM++SALSAFR KE+EIE+ R EV++++QA+LGRVE+E +RL++IREELE++ADPMRKE+  +RK+I
Subjt:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI

Query:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEM---VGESERLRLRRLEELSKHVD
        D+VNKELKPLG T QK+E+EYK+AL+ FNEKN EKVQL++KLMEM   VGESE+LR+ +LEELSK ++
Subjt:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEM---VGESERLRLRRLEELSKHVD

AT2G36410.2 Family of unknown function (DUF662)4.1e-4761.82Show/hide
Query:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI
        Q++  PQ  QQ   M+ ++G+ SFS   S++DEEM++SALSAFR KE+EIE+ R EV++++QA+LGRVE+E +RL++IREELE++ADPMRKE+  +RK+I
Subjt:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI

Query:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVD
        D+VNKELKPLG T QK+E+EYK+AL+ FNEKN EKVQL++KLME+VGESE+LR+ +LEELSK ++
Subjt:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVD

AT2G36410.3 Family of unknown function (DUF662)5.9e-4661.21Show/hide
Query:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI
        Q++  PQ  QQ   M+ ++G+ SFS   S++DEEM++SALSAFR KE+EIE+ R EV++++QA+LGRVE+E +RL++IREELE++ADPMRKE+  +RK+I
Subjt:  QAEQNPQ-HQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRI

Query:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVD
        D+VNKELKPLG T QK+  EYK+AL+ FNEKN EKVQL++KLME+VGESE+LR+ +LEELSK ++
Subjt:  DAVNKELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVD

AT3G09980.1 Family of unknown function (DUF662)4.4e-4965Show/hide
Query:  PQHQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVNKE
        P     QL  Q SG+ SFS   SK+DEEMS++ALSAFR KEEEIE+ + E+++++QA+LGRVEEE +RLA IREELE +ADPMRKE+  +RK+ID+VNKE
Subjt:  PQHQQLQLMLQNSGNFSFS---SKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVNKE

Query:  LKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN
        LKPLG T QK+E+EYK+ALEAFNEKN EKVQL+++LME+VGESE++R+++LEELSK++D+
Subjt:  LKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDN

AT3G52920.2 Family of unknown function (DUF662)2.0e-4661.59Show/hide
Query:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN
        +A   P  Q + L        S  SK+DEEM++SALSAFR KE+EIE+ + EV+++++A+LGRVEEE RRLASIREELE +ADPMRKE+  +RK+ID+VN
Subjt:  QAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVN

Query:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS
        KELKPLG T QK+E+EYK+AL+ FNEKN EKVQL++KLME+VGESE+LRL++L+ELS+ +D  S
Subjt:  KELKPLGQTCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGGCGGAGCAAAATCCACAGCACCAGCAGCTTCAATTGATGTTACAGAATTCTGGAAATTTTAGTTTCAGTAGCAAAGACGATGAAGAGATGTCCAAATCGGC
GCTTTCGGCTTTTAGGGAGAAGGAAGAGGAGATCGAGCGGATGAGGACCGAAGTTCAGCAGAAACTTCAAGCTCGACTCGGCCGTGTCGAGGAAGAAAACAGGCGTTTGG
CTTCCATTCGAGAGGAACTTGAAGCAATAGCGGATCCAATGAGGAAAGAAATCGGACAGATTCGTAAGAGAATTGATGCAGTAAACAAGGAATTAAAACCACTAGGACAA
ACATGCCAAAAAAGGGAGAAAGAATACAAAGATGCCCTTGAGGCCTTCAATGAAAAGAACAGCGAGAAAGTACAATTAGTATCAAAACTAATGGAGATGGTTGGTGAAAG
TGAAAGGCTGAGGCTGAGGAGGTTGGAAGAACTGAGTAAGCATGTGGACAACACTTCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAGATGGGAAGAACAGATTATAAAAAAAACAAAAAGGAAAGAAAAATGAGCAGCCCATGAAAGGAAAGGGAAGGGAGTTCATAGTTCATTCATTCAACCAACAAAGAGA
CAAGAACGCTTCCTCTGAAAAAATCGAGAGAAAAAGTTGAAGATGCAGCAGGCGGAGCAAAATCCACAGCACCAGCAGCTTCAATTGATGTTACAGAATTCTGGAAATTT
TAGTTTCAGTAGCAAAGACGATGAAGAGATGTCCAAATCGGCGCTTTCGGCTTTTAGGGAGAAGGAAGAGGAGATCGAGCGGATGAGGACCGAAGTTCAGCAGAAACTTC
AAGCTCGACTCGGCCGTGTCGAGGAAGAAAACAGGCGTTTGGCTTCCATTCGAGAGGAACTTGAAGCAATAGCGGATCCAATGAGGAAAGAAATCGGACAGATTCGTAAG
AGAATTGATGCAGTAAACAAGGAATTAAAACCACTAGGACAAACATGCCAAAAAAGGGAGAAAGAATACAAAGATGCCCTTGAGGCCTTCAATGAAAAGAACAGCGAGAA
AGTACAATTAGTATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAGGCTGAGGCTGAGGAGGTTGGAAGAACTGAGTAAGCATGTGGACAACACTTCCTAATTTGATT
CATCTGTTTGTAGCCCTTTGTGGTATGTGTTTTACTCTCTGTCTATGTCTGTATTATGGGTGTTTTACTTTAACCACTCTCTTATATTTTGATTTCATTTTGGTTTAGTT
TACTTCACTTGAACCAACATTCATAACTTAGGGTAACCACTGTCTTATATGTATGTATTGCTTTCAACTAATACAAAGATATATTGTATTTAAACTTTTCATCATTTGCC
ATGCACATTCCTTGGAAAACATGTAGAATTTGATATACAAAGTATTCCATTTCTTTA
Protein sequenceShow/hide protein sequence
MQQAEQNPQHQQLQLMLQNSGNFSFSSKDDEEMSKSALSAFREKEEEIERMRTEVQQKLQARLGRVEEENRRLASIREELEAIADPMRKEIGQIRKRIDAVNKELKPLGQ
TCQKREKEYKDALEAFNEKNSEKVQLVSKLMEMVGESERLRLRRLEELSKHVDNTS