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CmoCh07G009680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G009680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP synthase epsilon chain, chloroplastic
Genome locationCmo_Chr07:4738701..4739720
RNA-Seq ExpressionCmoCh07G009680
SyntenyCmoCh07G009680
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009751996.1 CF1 subunit epsilon [Cionosicys macranthus]1.1e-07100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

YP_009752081.1 CF1 subunit epsilon [Dendrosicyos socotranus]1.1e-07100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

YP_009752841.1 CF1 subunit epsilon [Baijiania yunnanensis]2.1e-0849.44Show/hide
Query:  PDGTRLARVELFFHLVTRLDWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        P  T L    L  HL    +W+   L+ G   +  N+                 +TILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  PDGTRLARVELFFHLVTRLDWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

YP_009752926.1 CF1 subunit epsilon [Momordica sessilifolia]4.8e-0857.14Show/hide
Query:  DWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +WL   L+ G   + +N+                 VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  DWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

YP_009913628.1 ATP synthase CF1 epsilon subunit [Luffa acutangula]1.1e-07100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

TrEMBL top hitse value%identityAlignment
A0A218KG49 ATP synthase epsilon chain, chloroplastic5.2e-08100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

A0A6H0ERT4 ATP synthase epsilon chain, chloroplastic5.2e-08100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

A0A6H0EUK5 ATP synthase epsilon chain, chloroplastic2.3e-0857.14Show/hide
Query:  DWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +WL   L+ G   + +N+                 VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  DWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

A0A6H0EVA7 ATP synthase epsilon chain, chloroplastic1.0e-0849.44Show/hide
Query:  PDGTRLARVELFFHLVTRLDWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        P  T L    L  HL    +W+   L+ G   +  N+                 +TILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  PDGTRLARVELFFHLVTRLDWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

G3ETZ1 ATP synthase epsilon chain, chloroplastic5.2e-08100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

SwissProt top hitse value%identityAlignment
P00833 ATP synthase epsilon chain, chloroplastic2.6e-0988.57Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +TILVNDAE+ SDIDPQEAQQTLEIAEANLRKA+G
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

P09468 ATP synthase epsilon chain, chloroplastic2.0e-0991.43Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +TILVNDAEK SDIDPQEAQQTLEIAEANLRKA+G
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

Q06RC3 ATP synthase epsilon chain, chloroplastic3.4e-0985.71Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +T+LVNDAE+ SDIDPQEAQQTLEIAEANLRKA+G
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

Q14FF1 ATP synthase epsilon chain, chloroplastic1.2e-0991.43Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VT+LVNDAEK SDIDPQEAQQTLEIAEANLRKA+G
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

Q4VZG9 ATP synthase epsilon chain, chloroplastic1.4e-10100Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG

Arabidopsis top hitse value%identityAlignment
ATCG00470.1 ATP synthase epsilon chain1.4e-1091.43Show/hide
Query:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG
        +TILVNDAEK SDIDPQEAQQTLEIAEANLRKA+G
Subjt:  VTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAGAAGAAAGCTTAAACCTTTTCCTGATGGAACTCGGCTGGCTCGGGTGGAACTATTCTTTCACTTGGTAACTAGGCTGGATTGGCTGGCTGATCTGCTCCT
GAACGGGAACCAGCACCTGACCCGGAACCAGAACCTGACGAGAATGAAAGAAGCCGCGACACGAAGTTCCCTTACCCTTCCGGTCACTATTTTAGTAAATGATGCGGAGA
AGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAATCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAAGAAGAAAGCTTAAACCTTTTCCTGATGGAACTCGGCTGGCTCGGGTGGAACTATTCTTTCACTTGGTAACTAGGCTGGATTGGCTGGCTGATCTGCTCCT
GAACGGGAACCAGCACCTGACCCGGAACCAGAACCTGACGAGAATGAAAGAAGCCGCGACACGAAGTTCCCTTACCCTTCCGGTCACTATTTTAGTAAATGATGCGGAGA
AGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAATCTGGCTTAG
Protein sequenceShow/hide protein sequence
MRRRRKLKPFPDGTRLARVELFFHLVTRLDWLADLLLNGNQHLTRNQNLTRMKEAATRSSLTLPVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGNLA