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CmoCh07G009990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G009990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr07:4909056..4910507
RNA-Seq ExpressionCmoCh07G009990
SyntenyCmoCh07G009990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595285.1 hypothetical protein SDJN03_11838, partial [Cucurbita argyrosperma subsp. sororia]4.4e-8298.68Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRCSTSFEVLTVFLLVSASLS CSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQK HVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
XP_022963066.1 uncharacterized protein LOC111463378 isoform X1 [Cucurbita moschata]1.8e-83100Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
XP_022963068.1 uncharacterized protein LOC111463378 isoform X2 [Cucurbita moschata]3.6e-84100Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
XP_022972748.1 uncharacterized protein LOC111471262 isoform X1 [Cucurbita maxima]8.3e-8198.01Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIR STSFEVLTVFLLVS SLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQK HVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
XP_022972750.1 uncharacterized protein LOC111471262 isoform X2 [Cucurbita maxima]1.7e-8198.03Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIR STSFEVLTVFLLVS SLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQK HVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
TrEMBL top hitse value%identityAlignment
A0A6J1CRX4 uncharacterized protein LOC1110136281.7e-7183.44Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRC+ +F V ++FL+VSA L+C + G ESAVVTLDS++IYKTHEWLASKPTVYF+CQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEF+SKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
        YEEDSIKSDDVFEEWE CPSDFTAP G+YVR+N+KEFNATF+CL+CTAYSN
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
A0A6J1HE82 uncharacterized protein LOC111463378 isoform X18.6e-84100Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
A0A6J1HGN3 uncharacterized protein LOC111463378 isoform X21.7e-84100Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
A0A6J1I9J5 uncharacterized protein LOC111471262 isoform X28.1e-8298.03Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIR STSFEVLTVFLLVS SLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQK HVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG
A0A6J1ICG3 uncharacterized protein LOC111471262 isoform X14.0e-8198.01Show/hide
Query:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF
        MPIR STSFEVLTVFLLVS SLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQK HVLYSFNGEESWQPLTEFKSKKCKRCGF
Subjt:  MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGF

Query:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
        YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
Subjt:  YEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G53490.1 unknown protein4.7e-4263.03Show/hide
Query:  VTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYN
        VTLDS+ I+ TH+W ++KPTV+F+C+G NKT LPDV++ +V YSFNGEESWQPLTE +  KCKRCG YE+D +K  D F+EWELCPSDFTA +G Y R+ 
Subjt:  VTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYN

Query:  KKEFNATFLCLECTAYSNG
        +KEFNATFLC  C+    G
Subjt:  KKEFNATFLCLECTAYSNG
AT5G02720.1 unknown protein3.0e-1246.03Show/hide
Query:  LTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAY
        +T    +KCKRCG YE+ S+ SD  F+ WE+CP+DF+A    Y+ + +KE NATF+C  C  +
Subjt:  LTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTCGGTGTAGTACGAGTTTCGAAGTTTTGACGGTTTTTCTTCTTGTTTCGGCATCTCTGAGCTGCTGTTCAGAGGGCGAAGAATCGGCGGTTGTTACGCTTGA
TTCCATCGTAATATACAAGACGCACGAATGGTTAGCTTCGAAACCGACTGTTTATTTTAAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGAGCATG
TTCTATACAGCTTCAATGGTGAAGAATCTTGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAGGAGGACAGCATTAAATCTGATGAT
GTATTTGAAGAATGGGAGTTATGTCCATCTGATTTTACTGCACCTGATGGGGAATATGTTCGATACAACAAAAAAGAGTTCAATGCCACTTTTCTGTGCTTGGAGTGCAC
AGCTTATTCCAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ACGGGTTTGTTCGCACGCCAAGGACCCAAATCGTCATACCCTCGAAGCTTCCGTTCGATTGAATCGGAGGTAAAACAAGTCGGCCACCGCCTTCTCCGTCGCCGGATAAC
TCATTGATCCCGTCGTTCTAACAGAAATCCGATATTCGTGATTATAGTTTTCTGAATTTGATTCAGGCGGGTTGCGTATAGGGTTTTGATTAATTCGCGATATGCCGATT
CGGTGTAGTACGAGTTTCGAAGTTTTGACGGTTTTTCTTCTTGTTTCGGCATCTCTGAGCTGCTGTTCAGAGGGCGAAGAATCGGCGGTTGTTACGCTTGATTCCATCGT
AATATACAAGACGCACGAATGGTTAGCTTCGAAACCGACTGTTTATTTTAAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGAGCATGTTCTATACA
GCTTCAATGGTGAAGAATCTTGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAGGAGGACAGCATTAAATCTGATGATGTATTTGAA
GAATGGGAGTTATGTCCATCTGATTTTACTGCACCTGATGGGGAATATGTTCGATACAACAAAAAAGAGTTCAATGCCACTTTTCTGTGCTTGGAGTGCACAGCTTATTC
CAATGGTTAG
Protein sequenceShow/hide protein sequence
MPIRCSTSFEVLTVFLLVSASLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDD
VFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNG