; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G010330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein, putative
Genome locationCmo_Chr07:5114847..5119928
RNA-Seq ExpressionCmoCh07G010330
SyntenyCmoCh07G010330
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595318.1 hypothetical protein SDJN03_11871, partial [Cucurbita argyrosperma subsp. sororia]2.1e-12976.92Show/hide
Query:  FSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVPKMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNL
        FSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVPKMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNL
Subjt:  FSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVPKMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNL

Query:  GNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQGATPQMDATDLFFTRPPRRTRRDACPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ--------
        GNDSDNLTEN+EEGDVKFSTPFQKFEQTAL+      P  +        P   +   A  +  PPSLASPSIS+QPPRSQPALRRSSVLMAQ        
Subjt:  GNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQGATPQMDATDLFFTRPPRRTRRDACPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ--------

Query:  -----------------------------------------QSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCC
                                                 QSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCC
Subjt:  -----------------------------------------QSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCC

Query:  KLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
        KLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
Subjt:  KLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS

KAG7027328.1 hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-15177.33Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        M+VGGGGDGGFSPRA+VEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTAL--VLLQGATPQMDATDLFFTRPPRRT-------
        KMKVKREVRDFEWPVAELRMLMDDSTVGKGKIN VNLGNDSDNLTEN+EEGDVKFSTPFQKFEQTAL   + + A+ ++     F     R T       
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTAL--VLLQGATPQMDATDLFFTRPPRRT-------

Query:  RRDACPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ-------------------------------------------------QSSGSFLHAKSIS
             P L PPSLASPSIS+QPPRSQPALRRSSVLMAQ                                                 QSSGSFLHAKSIS
Subjt:  RRDACPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ-------------------------------------------------QSSGSFLHAKSIS

Query:  GGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
        GGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
Subjt:  GGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS

XP_022962693.1 uncharacterized protein LOC111463108 [Cucurbita moschata]1.3e-8698.83Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ
        KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVL +
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ

XP_022972790.1 uncharacterized protein LOC111471294 isoform X1 [Cucurbita maxima]1.3e-8194.15Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRA+VEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRK+EAKEGETA RKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ
        KM VKREVRDFEWPVAELRMLMDDSTVGKGK NTVNLGNDSD LTEN+EEGDVK STPFQKFEQTALVL +
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ

XP_023518840.1 uncharacterized protein LOC111782239 [Cucurbita pepo subsp. pepo]8.0e-8495.91Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRA+VEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRK+EAKEGETA RKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ
        KM VKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTEN+EEGDVKFSTPFQKFEQTALVL +
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ

TrEMBL top hitse value%identityAlignment
A0A0A0L270 Uncharacterized protein1.6e-5873.21Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKV
        ME  GGG+GGFS RA+VEDI+RRLLRP SS+HSPPPTPFS GK+ Q RNSSQFEAN M L   +EAK+GET+ ++RKLEDYLDPVLLSA+SSKISR +K+
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKV

Query:  PKMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTAL
        PK+ VKR+VRDFEW V ELRM  +D+ VGK KI+ VNLGNDSDNL EN+ +GDVKFSTPFQKFEQ AL
Subjt:  PKMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTAL

A0A6J1HEB8 uncharacterized protein LOC1114634091.0e-6073.06Show/hide
Query:  CPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ-------------------------------------------------QSSGSFLHAKSISGGSL
        C   MPPSLASPSISDQPPRSQPALRRSSVLMAQ                                                 QSSGSFLHAKSISGGSL
Subjt:  CPLLMPPSLASPSISDQPPRSQPALRRSSVLMAQ-------------------------------------------------QSSGSFLHAKSISGGSL

Query:  ISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
        ISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS
Subjt:  ISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPRPSNLLAS

A0A6J1HFI5 uncharacterized protein LOC1114631086.4e-8798.83Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ
        KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVL +
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ

A0A6J1I6X7 uncharacterized protein LOC111471294 isoform X26.2e-6696.38Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRA+VEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRK+EAKEGETA RKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLG
        KM VKREVRDFEWPVAELRMLMDDSTVGKGK NTVNLG
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLG

A0A6J1I9M7 uncharacterized protein LOC111471294 isoform X16.2e-8294.15Show/hide
Query:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP
        MEVGGGGDGGFSPRA+VEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRK+EAKEGETA RKRKLEDYLDPVLLSAVSSKISRAQKVP
Subjt:  MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVP

Query:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ
        KM VKREVRDFEWPVAELRMLMDDSTVGKGK NTVNLGNDSD LTEN+EEGDVK STPFQKFEQTALVL +
Subjt:  KMKVKREVRDFEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02440.1 unknown protein9.9e-0835.82Show/hide
Query:  SLASPSISDQPPRSQPALRRSSVLMAQQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKN--DFKS--KPWLFSLCCKLSTDAVSVT
        SL SPS S Q          SS  +  QS GSF   +S + G+LI  S  +ELSRRS+R  + +T      ++  + K+  KPW+FS+C KLST+A  ++
Subjt:  SLASPSISDQPPRSQPALRRSSVLMAQQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKN--DFKS--KPWLFSLCCKLSTDAVSVT

Query:  -------------RTHSLAHFLEAERRRTAANCR
                        SL HFL  ERR   +  R
Subjt:  -------------RTHSLAHFLEAERRRTAANCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCGGCGGAGGAGGAGATGGAGGTTTTAGTCCTCGCGCCAGCGTAGAAGACATACAGAGACGGCTGCTTCGACCGTCGTCGATTCACTCACCACCTCCGACGCC
GTTTTCTCGCGGCAAAGATGTTCAAGGTCGAAATTCATCGCAGTTCGAGGCGAATGCCATGGGGCTTTATCGTAAACAAGAAGCAAAAGAAGGAGAAACTGCGAGAAGGA
AGAGGAAACTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCGGTTTCTTCGAAGATCAGTCGTGCGCAGAAGGTTCCTAAGATGAAGGTAAAGAGAGAGGTTAGGGAT
TTTGAGTGGCCCGTCGCTGAATTGAGGATGTTGATGGATGATTCGACGGTCGGAAAGGGGAAAATTAATACTGTTAATCTCGGTAATGACTCTGATAATCTCACAGAAAA
TAATGAAGAAGGAGATGTTAAATTCTCTACTCCGTTTCAAAAATTTGAGCAGACTGCGTTGGTACTGCTACAGGGTGCCACACCACAGATGGATGCTACTGACCTTTTCT
TTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGTCTTTGGCGTCTCCTAGTATATCAGATCAACCACCTCGGTCTCAGCCAGCGCTT
AGGAGGTCCAGCGTATTGATGGCTCAACAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAG
AAGATCATCAAGAGGGGGAAGCACAGAAACCAGCCTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACG
CTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGCTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGG
CCACGTCCCAGTAATTTGTTGGCCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCGGCGGAGGAGGAGATGGAGGTTTTAGTCCTCGCGCCAGCGTAGAAGACATACAGAGACGGCTGCTTCGACCGTCGTCGATTCACTCACCACCTCCGACGCC
GTTTTCTCGCGGCAAAGATGTTCAAGGTCGAAATTCATCGCAGTTCGAGGCGAATGCCATGGGGCTTTATCGTAAACAAGAAGCAAAAGAAGGAGAAACTGCGAGAAGGA
AGAGGAAACTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCGGTTTCTTCGAAGATCAGTCGTGCGCAGAAGGTTCCTAAGATGAAGGTAAAGAGAGAGGTTAGGGAT
TTTGAGTGGCCCGTCGCTGAATTGAGGATGTTGATGGATGATTCGACGGTCGGAAAGGGGAAAATTAATACTGTTAATCTCGGTAATGACTCTGATAATCTCACAGAAAA
TAATGAAGAAGGAGATGTTAAATTCTCTACTCCGTTTCAAAAATTTGAGCAGACTGCGTTGGTACTGCTACAGGGTGCCACACCACAGATGGATGCTACTGACCTTTTCT
TTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGTCTTTGGCGTCTCCTAGTATATCAGATCAACCACCTCGGTCTCAGCCAGCGCTT
AGGAGGTCCAGCGTATTGATGGCTCAACAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAG
AAGATCATCAAGAGGGGGAAGCACAGAAACCAGCCTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACG
CTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGCTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGG
CCACGTCCCAGTAATTTGTTGGCCAGCTGAAACACTCTCTTTAAGTGAGGTACTTGGGACCCTTCATTTTCTAGTTTGGTTATTTTCGTTTCTTCTCTCTTTTTGTGCAT
ATTCGGATGGAGAGTGTTACTTTGTGGGTTCTGTTCATTTAAATTCGGAATATGAAAATTCAAGTTAATCTAAATGTAGGCCAAACGAGGTAATTGTTAGGTACTATTTT
CTTTAGAATGGTACATTCGAAATTTCGTACACTCCCAAAAAGTTTACTAAAAAAATTAATGTGAATATAGGCGGT
Protein sequenceShow/hide protein sequence
MEVGGGGDGGFSPRASVEDIQRRLLRPSSIHSPPPTPFSRGKDVQGRNSSQFEANAMGLYRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVPKMKVKREVRD
FEWPVAELRMLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTALVLLQGATPQMDATDLFFTRPPRRTRRDACPLLMPPSLASPSISDQPPRSQPAL
RRSSVLMAQQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGR
PRPSNLLAS